Transcript Information: R_Transcript_216282.p1


Annotated TAIR IDAT1G05780.1
Annotated Gene NameVacuolar ATPase assembly integral membrane protein VMA21-like domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1726761-1728180 | Forward length=106
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.784444433233
Replicate 230.373288951732
Replicate 338.029632319826
Condition 2: 8 Hour
Replicate 132.33085080413
Replicate 226.051512824682
Replicate 336.655679699422
Condition 3: 24 Hour
Replicate 136.999961163096
Replicate 231.262794155576
Replicate 340.375377577772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_216282.p1 GENE.R_Transcript_216282~~R_Transcript_216282.p1 ORF type:complete len:103 (+),score=21.06,VMA21|PF09446.6|5.4e-19 R_Transcript_216282:262-570(+)
ATGGCGACAATGGCAGAAACAGTGAAGAAGTTTTTCATTGCCTCAATGTTTATGTGGATATTGCCTATAGCTATCGTATATAGCTTTCAACATGATTGGTTTTCCGGTTTGATTCAGGTTTCACCTTATTACCAGACACTATTGGGTGGATTTCTTGCTGTTATATCAGTTAATGTGGTAATTGCATTGTACATATGCATGGCAATGAAAGAGCCTTCAGATAAGCATGAACCAGATCCTGCATTTGTTGCCAAGGCTAAAGCCAGTCTGAATCAGTCTAAACCTGGGAATAGTGAAAAGGAAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_216282.p1 GENE.R_Transcript_216282~~R_Transcript_216282.p1 ORF type:complete len:103 (+),score=21.06,VMA21|PF09446.6|5.4e-19 R_Transcript_216282:262-570(+)
MATMAETVKKFFIASMFMWILPIAIVYSFQHDWFSGLIQVSPYYQTLLGGFLAVISVNVVIALYICMAMKEPSDKHEPDPAFVAKAKASLNQSKPGNSEKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST