Transcript Information: R_Transcript_216517.p1


Annotated TAIR IDAT3G61360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22704630-22706126 | Reverse length=498
E-Value1E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8520251491748
Replicate 22.0914283617797
Replicate 33.1765202525914
Condition 2: 8 Hour
Replicate 13.0607331184057
Replicate 23.3628669956471
Replicate 33.6161411782802
Condition 3: 24 Hour
Replicate 13.90103365002
Replicate 22.6707540062808
Replicate 33.7619492430605


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_216517.p1 GENE.R_Transcript_216517~~R_Transcript_216517.p1 ORF type:complete len:512 (-),score=88.80,PPR_2|PF13041.2|29,PPR_2|PF13041.2|74,PPR_2|PF13041.2|7.9e-05,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|2.3e-11,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|0.067,PPR_2|PF13041.2|0.049,PPR|PF01535.16|97,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.02,PPR|PF01535.16|18,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|0.53,PPR|PF01535.16|5.9e-05,PPR|PF01535.16|1.2,PPR|PF01535.16|36,PPR|PF01535.16|0.28,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|6.2,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.0077,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|6e+02,PPR_1|PF12854.3|0.51,PPR_3|PF13812.2|9.4e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|61,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|6.6 R_Transcript_216517:775-2310(-)
ATGCTTGCTTTCTTCCAGCCAAGGAGTGTCAGACAGTTGATTAAACAACATCGGAACACCACATATTTTGCCTTTGCTTTCAAATCATTCTGCCAGTCCTGCCTTTCTGTGGATAGAAAAAAGGAAGTTGAGAGGATTACAAAAATCATAAATGATCATCCATTTCCTGACTTACCACTTCTGCCTACACTTCTCCAGCATATCACTCCTTCAAACCTTTCAGTTACATTTGTAGAGGATGTTCTTGGGCGTTTATTCGCAGCCCATAGTAATGGGCTTAAAGCTTGTGAGTTCTTCAAATTCACCCTCCAATATCCCCAATTGCATCCAACTTCAGATGCTTTTGAGAAGACACTGCACATTCTTACACGAATGCGGTATTTTGATGAAGCATGGCAATTGATGGAGGAAATCGGTAAAATGGACCCGTCTTTGCTGACCCTCAAGTCAATGAACATTCTTCTGTCTAAAATTGCTAAATTCCAGTCCTATGAAGATACACTTGAGGCATTTGAGAGGATGGAGAAGAACATATTTGTCGGAAGAACATTCGGAACACACGAGTTCAATGTATTGCTTCGCGTATTTTGCAGCCAAAGGCAGATGAAGGAGTCAAAATCGGTGTTCAACAAGATGTACTTACGTTTCCCGCCTAACACAAAGACCATGAACATTCTGCTCTTGGGTTTCAAGGAATCTGGTGATATTGCTGCAGTTGAACTATTCTACCATGAGCTAGTGAAAAGAGGTTTCAAGCCTAATAATGTGACTTGTAACATCAGAATTGATGCTTACTGCAAGAGAGGTTGCTTTGGGGATGGGTTGCGACTTTTGCAAGATATGGAACAGATGAATTGCTTGCCAACACTGGAAACAATCACAACTTTAATTCATGGAGCTGGCATTGCGAGAAATGTGACGCGGGCATGGGAGTTGTTCAATGAACTGCCTACAAGAAATCTGTACCCTGATATTGGGGCTTATAATGCTATGATAAGCGTTCTAGTGAAATGTAGACGGATAGACAATGCTGTTAGTTTGATGACTGAGATGGAAGAGAAGTGTATGGAGCCGGATGGCATGACTTACCATACACTGTTCAGTGGCCTGATGAAGTCAAATGGCATTGATGCTGTCACAAGACTCTACCAAAAAATGGTTGCTGCAAACTTCATTCCAAAGACACGTACGGCTGTGATGCTAATGAAATTTTTTTGTGGGAATCGTCGTGTCGATCTGGGTCTGAAATTGTGGGAATACTTGATGGAAAAGGGTTATTGCCCTCATGATCATGCATTGGCTCTTCTCGTGACAGGGTTGTGTTCGCAAAGAAGGGTGCAAGAAGCTTTCGAATGTGCTAAGCAGATGTTGAGCAGAGGGAGGCATATGAGTAAACCAGCATTTCACATGTTGGAGAGGTTTTTGCAGGAGGCAGGTGAGGCAGACAAACTAAGACACCTTGATGAAATGATAAGGAAACTTGGTAGTGTTTATCCCCCATCAAGAGGACATGCTCTTGGACTTTCTCCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_216517.p1 GENE.R_Transcript_216517~~R_Transcript_216517.p1 ORF type:complete len:512 (-),score=88.80,PPR_2|PF13041.2|29,PPR_2|PF13041.2|74,PPR_2|PF13041.2|7.9e-05,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|2.3e-11,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|0.067,PPR_2|PF13041.2|0.049,PPR|PF01535.16|97,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.02,PPR|PF01535.16|18,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|0.53,PPR|PF01535.16|5.9e-05,PPR|PF01535.16|1.2,PPR|PF01535.16|36,PPR|PF01535.16|0.28,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|6.2,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.0077,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|6e+02,PPR_1|PF12854.3|0.51,PPR_3|PF13812.2|9.4e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|61,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|6.6 R_Transcript_216517:775-2310(-)
MLAFFQPRSVRQLIKQHRNTTYFAFAFKSFCQSCLSVDRKKEVERITKIINDHPFPDLPLLPTLLQHITPSNLSVTFVEDVLGRLFAAHSNGLKACEFFKFTLQYPQLHPTSDAFEKTLHILTRMRYFDEAWQLMEEIGKMDPSLLTLKSMNILLSKIAKFQSYEDTLEAFERMEKNIFVGRTFGTHEFNVLLRVFCSQRQMKESKSVFNKMYLRFPPNTKTMNILLLGFKESGDIAAVELFYHELVKRGFKPNNVTCNIRIDAYCKRGCFGDGLRLLQDMEQMNCLPTLETITTLIHGAGIARNVTRAWELFNELPTRNLYPDIGAYNAMISVLVKCRRIDNAVSLMTEMEEKCMEPDGMTYHTLFSGLMKSNGIDAVTRLYQKMVAANFIPKTRTAVMLMKFFCGNRRVDLGLKLWEYLMEKGYCPHDHALALLVTGLCSQRRVQEAFECAKQMLSRGRHMSKPAFHMLERFLQEAGEADKLRHLDEMIRKLGSVYPPSRGHALGLSPS*

Click here to download the sequence:
Link to NCBI Protein BLAST