Transcript Information: R_Transcript_216641.p1


Annotated TAIR IDAT4G11690.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7056254-7057954 | Forward length=566
E-Value1.4E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52848216572682
Replicate 20.60791070247634
Replicate 30.40813786362855
Condition 2: 8 Hour
Replicate 10.3272053222349
Replicate 20.69722126008151
Replicate 30.36384074740197
Condition 3: 24 Hour
Replicate 10.97148850184049
Replicate 20.54032928239722
Replicate 30.77996275053532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_216641.p1 GENE.R_Transcript_216641~~R_Transcript_216641.p1 ORF type:complete len:449 (+),score=88.97,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|1.9e-17,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|1.2e-20,PPR_2|PF13041.2|2e-19,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|3.2e-05,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|3.5e-06,PPR_1|PF12854.3|21,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|1.6e-14,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|5.2e-13,PPR_1|PF12854.3|3.9e-13,PPR_1|PF12854.3|3.2e-13,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|3.4e-09,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|5.9e-08,PPR_1|PF12854.3|5.3e-06,PPR_1|PF12854.3|9.3e+03,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0079,PPR|PF01535.16|3.2e-11,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|5.5e-10,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|5.1e-09,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.00013,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|8.5e-05,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|5.1e-06,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.00055,PPR_3|PF13812.2|0.00069,PPR_3|PF13812.2|7.2e-07,PPR_3|PF13812.2|8e-06,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.069 R_Transcript_216641:719-2065(+)
ATGATCAATCATGGGTGTGTACCAAGATCAAATCTTTTTAATTCCTTGTTGGGTCTTCTCTTAGAAAGCAATAATCTTGAAAGGGCTTGGTGGGTTTTTGATGAATTTAAGTGTAGTATTGAAATGGATGAGTATAGTTTTGGGATTATGATCAAGGGGTTTTGTGAAGCAAATGATTTGGATAGGGCTTTTAGGGTTTTGGGTAGATTGGGGGATGTGGGTTTGTCTCCAAATGTTGTTATTTATACTACTTTGATTGATGGATGTTGTAAAAATGGTGATATTGATAAAGCAAAGGAGTTGTTTTGTAAGATGGAGGAATTAGGGTTAGTTGCTAATCAGCATACTTATACTGTTTTGATGAATGGGTTCTTGAAGAAAGGGATGAAAAAAGAAGGGTTTGAGTTGTATGAGAAGATGAGGCTGAATGGAATTATGCCTAATGTTTATACCTACAATTCCATGATCAATGAGTATTGTAAAAGTGGGTTATTAGGTAAAGCCTTCCTACTGTTTGATGAAATGCTTGAGAGAGGATTGGTATGCAATGTTGTGACCTACAATATATTGATTAGTGGCCTGTGCAAGGAGAAGAAGCTTTGGGAGGCTAAAGAATTGTTGCGACGGATGAAGGGTTATGGTCTGAGTCCGAACTTGATCACCTATAACACCCTTATTGATGGGTTCTGTAATGTTGGAAAGTTGAGCCCGGCTTTGAGTTTGTTTGAACAAATGAAGGAGGAAGGTCTAATGCTGTCTTTGGTGTCCTATAATGTTCTTATTTCAGGTTTTTCTAAAGCTGGGAATTCCAATAGGGCTGCCAATTTAGTGAGGGAGATGGAAGAGAGAGGGATCACCCCATCTAAAGTGACATACACGATTCTAATAGATGCATGTATTCGATCGGGTAACATGGACAAGGCATTTGAAATGTTTAATTCTATGGAGAAGGCTAGCTTGGCAGCAGATGCGTACACTATTGGTGCCTTGATAAATGGACTGTGTAGCATTGGTAATATGTTAGAAGCATCAAAGTTGTTCAAGTCAATGGAGGACATGCATTTGCATCCAAACGATGTGATTTATAACATGATGATTAATGGTTATTGTAAAGAGGGGAGTTCTTATAGAGCCCTGAGATATCTGAGAGACATGAGGTATCAAGGAATGATTCCAAATGTTGCTAGCTACTGCTCAACTACAGGAGTCCTTTGTAAAGATGGGAAGTTAAAAGAGGCTGAAGAACTGCTTGAGGAGATGGTAAGCTTAGGTCTTAAACCATCAAATTCTGTTTACAAAACTCTTTCTCAAGCTAAAGAAGATGATAAGCTCTCCCTCCCACCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_216641.p1 GENE.R_Transcript_216641~~R_Transcript_216641.p1 ORF type:complete len:449 (+),score=88.97,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|1.9e-17,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|1.2e-20,PPR_2|PF13041.2|2e-19,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|3.2e-05,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|3.5e-06,PPR_1|PF12854.3|21,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|1.6e-14,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|5.2e-13,PPR_1|PF12854.3|3.9e-13,PPR_1|PF12854.3|3.2e-13,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|3.4e-09,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|5.9e-08,PPR_1|PF12854.3|5.3e-06,PPR_1|PF12854.3|9.3e+03,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0079,PPR|PF01535.16|3.2e-11,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|5.5e-10,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|5.1e-09,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.00013,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|8.5e-05,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|5.1e-06,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.00055,PPR_3|PF13812.2|0.00069,PPR_3|PF13812.2|7.2e-07,PPR_3|PF13812.2|8e-06,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.069 R_Transcript_216641:719-2065(+)
MINHGCVPRSNLFNSLLGLLLESNNLERAWWVFDEFKCSIEMDEYSFGIMIKGFCEANDLDRAFRVLGRLGDVGLSPNVVIYTTLIDGCCKNGDIDKAKELFCKMEELGLVANQHTYTVLMNGFLKKGMKKEGFELYEKMRLNGIMPNVYTYNSMINEYCKSGLLGKAFLLFDEMLERGLVCNVVTYNILISGLCKEKKLWEAKELLRRMKGYGLSPNLITYNTLIDGFCNVGKLSPALSLFEQMKEEGLMLSLVSYNVLISGFSKAGNSNRAANLVREMEERGITPSKVTYTILIDACIRSGNMDKAFEMFNSMEKASLAADAYTIGALINGLCSIGNMLEASKLFKSMEDMHLHPNDVIYNMMINGYCKEGSSYRALRYLRDMRYQGMIPNVASYCSTTGVLCKDGKLKEAEELLEEMVSLGLKPSNSVYKTLSQAKEDDKLSLPP*

Click here to download the sequence:
Link to NCBI Protein BLAST