Transcript Information: R_Transcript_216650.p1


Annotated TAIR IDAT1G79590.1
Annotated Gene Namesyntaxin of plants 52
Annotated Gene Symbol(s)SYP52, ATSYP52
Annotation TypeHomolog
Chromosome Positionchr1:29947064-29948304 | Forward length=233
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.955186018562
Replicate 227.421892354044
Replicate 338.704487662465
Condition 2: 8 Hour
Replicate 129.129735885516
Replicate 237.300264105771
Replicate 341.70176060632
Condition 3: 24 Hour
Replicate 134.436710841556
Replicate 236.220058781508
Replicate 333.774992577195


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_216650.p1 GENE.R_Transcript_216650~~R_Transcript_216650.p1 ORF type:complete len:232 (+),score=36.74,SNARE|PF05739.15|1.2e-09 R_Transcript_216650:137-832(+)
ATGTCTTCTCCTTCTGAGTCATGGATGCGGGAATATAATGAAGCATCAAAGCTTGCTGATGAGATAAATGGTATGGTATCTGAGGCAAGTACTCTGCCTCCTACGGGACCACAAACACAGCGACATTTTTCTGGTACTCGTAGAAAGATCACCATATTAAAGACTAAACTTGATAGTCTGGAGTCTTTTTTGGCAAAGCTACCTAGCATGCAGCCTTTGACAGGAAAAGAGCTAAATAGACGTAATGACTTGCTAACAAATATGAAATCCAAAGTGAACCAGATGGCAAATACTCTCAACTCTTACAGTTCGAGTTACAGGGACCGCTTACTAGGTCCAGATTTGAAGTCAGATGATGTAATGAAGAGAGCATCTAACATGGACAACCAAGGCCTTGTAGGCTTTCAGCGGCAGATTATGAGAGAACAAGATGATGGCCTTGAGAAATTGGAGGAGACAGTATTAAGTACAAAACATATTGCACTTGCTGTCAATGAGGAGCTCCATCTTCACACTAGGCTCCTGGATACATTGGACGATCATGTGGAGTCATCAAACTCCCGTATGCAGCGTATCCAAAGGAGATTGGCCATGCTAAACAAACGCACCAAAGGAGGCTGCTCATGCTTGTGTCTGCTCGTTATCTTGATTGTTGTTCTCATAGTTGCTGTGTTGGTACTGATCAAATACTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_216650.p1 GENE.R_Transcript_216650~~R_Transcript_216650.p1 ORF type:complete len:232 (+),score=36.74,SNARE|PF05739.15|1.2e-09 R_Transcript_216650:137-832(+)
MSSPSESWMREYNEASKLADEINGMVSEASTLPPTGPQTQRHFSGTRRKITILKTKLDSLESFLAKLPSMQPLTGKELNRRNDLLTNMKSKVNQMANTLNSYSSSYRDRLLGPDLKSDDVMKRASNMDNQGLVGFQRQIMREQDDGLEKLEETVLSTKHIALAVNEELHLHTRLLDTLDDHVESSNSRMQRIQRRLAMLNKRTKGGCSCLCLLVILIVVLIVAVLVLIKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST