Transcript Information: R_Transcript_217117.p1


Annotated TAIR IDAT1G11915.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4021830-4023084 | Forward length=329
E-Value3.3E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6830900442756
Replicate 22.4921424826467
Replicate 33.1947082107394
Condition 2: 8 Hour
Replicate 12.761017412449
Replicate 23.1185799600467
Replicate 34.2551253383103
Condition 3: 24 Hour
Replicate 13.6105750239416
Replicate 22.7487266273123
Replicate 33.1824852512106


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_217117.p1 GENE.R_Transcript_217117~~R_Transcript_217117.p1 ORF type:complete len:337 (+),score=24.21,GUB_WAK_bind|PF13947.2|4e-13 R_Transcript_217117:30-1040(+)
ATGATCAAATTCTTCCAAATGGACCACCCCAAATTCCATATTATCTTAACTATGATCACATTCATATTCTCATTTTTTCCATCAACATTACCACAATCCTCAAAATGCAGGACTTCTTGTGGAGGGATTCCCATAAAGTATCCATTAAGCATTGATGATGGATGTGGAAGCCCGTATTATCGCCATATCTTGGTGTGCTCCGAACCCGCCAATGTGTTGGAGCTCCGAACCCCATCGGGCCGGTATCCGGTTAAGTTTATTAGCTATACGGATCCTCATATTCTGATCTCGGATCCTCTCATGTGGGCCTGTAGTGATGGTGATCGGTTCCGGCCCACTAGGGCCTTTAGTCTTGACACTAGTGTACATCTATCGTTGTCTTCTCAGAATGAGTACCTCTTCTTTAATTGTAGTTCTGATCAGGTGATCATGGAGCCCAGACCAATGTTTAGTGAAAGGTTCCCGGACCGTTGTGATGCAAGCTGCGATCCATCAAGCTACTTGTGCCGTCATTTACCCGAATGTGGGCCCAATGCCATTAAGGACACCTCATGTTGCTCTTACTACCCTAAGGCAACAGAGTCCTTAAGAATGATGCTCAAGCATTGTGCTTCTTACACTAGTATTCATTGGAAGAATGTTGGTGGTTTAGGGACTTCTAGACCTTTTGATCAGGTCCCGGAGTATGGTTTGAGGGTGGATTTCGATATCCCGGTCACCACCAAGTGTCTCCGGTGCCAGGACCGAGCTCAGGGTGGCGGTACGTGTGGGTTCCACACCAGCAACCAGGAGTTCTTGTGCCTGTGTGAGGAGAAGAATGTCACCACTTCTTGTAAAGATCATGATAATGTGACACACAGTGGGCGTACAGGAGTTATAGCAGGAACGGTGACGGTGGCGTCGTTGGCCGGAGGAGTAGGTATTGGAGCTGGCATTTGGTATCTGAAGAGGGTGAGAGCCAAAGCACCAGTTACTCATGGTGTTCAAAACAATGAAAACAGGCTTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_217117.p1 GENE.R_Transcript_217117~~R_Transcript_217117.p1 ORF type:complete len:337 (+),score=24.21,GUB_WAK_bind|PF13947.2|4e-13 R_Transcript_217117:30-1040(+)
MIKFFQMDHPKFHIILTMITFIFSFFPSTLPQSSKCRTSCGGIPIKYPLSIDDGCGSPYYRHILVCSEPANVLELRTPSGRYPVKFISYTDPHILISDPLMWACSDGDRFRPTRAFSLDTSVHLSLSSQNEYLFFNCSSDQVIMEPRPMFSERFPDRCDASCDPSSYLCRHLPECGPNAIKDTSCCSYYPKATESLRMMLKHCASYTSIHWKNVGGLGTSRPFDQVPEYGLRVDFDIPVTTKCLRCQDRAQGGGTCGFHTSNQEFLCLCEEKNVTTSCKDHDNVTHSGRTGVIAGTVTVASLAGGVGIGAGIWYLKRVRAKAPVTHGVQNNENRLF*

Click here to download the sequence:
Link to NCBI Protein BLAST