Transcript Information: R_Transcript_217171.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0828027685003
Replicate 20.71173899716265
Replicate 30
Condition 2: 8 Hour
Replicate 10.4150146601228
Replicate 20.37899799730823
Replicate 30.61530883458939
Condition 3: 24 Hour
Replicate 10.58367306511112
Replicate 20.37381794729792
Replicate 30.55646706831095


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_217171.p1 GENE.R_Transcript_217171~~R_Transcript_217171.p1 ORF type:5prime_partial len:118 (+),score=5.25,RVT_1|PF00078.23|7.2e-18 R_Transcript_217171:2-355(+)
GCGGATATCATTTCTCCTTTTCAAAACAGCTTTATTCAGGGTAGGAACTCCAATGTCAACTTTGTGGTTGCTAACGAGATCCTTCACTCAATGAAGATTAAAAAAGAAAAAAAGGGTTGGTTTGCACTTAAAATCGATCTTGAAAAGGCCTACGATAGAATGGAATGGAGCTTCATTAGAAATTCCCTTGCATATCATCATTTGGATAATGAATTCATTAAACTTATTATGAGCTGTATATCCACTACCTCTTGTTCTATTCTTGTTAATAGGAACACCACGGAATGGTTCGACCCTTCGAGGGGCATCCAACAGGGAGACCCCCTCTCCCCTACATTTATATCCTCTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_217171.p1 GENE.R_Transcript_217171~~R_Transcript_217171.p1 ORF type:5prime_partial len:118 (+),score=5.25,RVT_1|PF00078.23|7.2e-18 R_Transcript_217171:2-355(+)
ADIISPFQNSFIQGRNSNVNFVVANEILHSMKIKKEKKGWFALKIDLEKAYDRMEWSFIRNSLAYHHLDNEFIKLIMSCISTTSCSILVNRNTTEWFDPSRGIQQGDPLSPTFISSA*

Click here to download the sequence:
Link to NCBI Protein BLAST