Transcript Information: R_Transcript_217352.p1


Annotated TAIR IDAT1G53440.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19945959-19951562 | Forward length=1035
E-Value5E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38485158639467
Replicate 20.44269308106652
Replicate 30.20698859273632
Condition 2: 8 Hour
Replicate 11.8438151315697
Replicate 22.2226177733709
Replicate 31.4761852010556
Condition 3: 24 Hour
Replicate 10.48405015239135
Replicate 20.33215751341231
Replicate 30.065926821346076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_217352.p1 GENE.R_Transcript_217352~~R_Transcript_217352.p1 ORF type:internal len:332 (+),score=29.20,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.13,LRR_8|PF13855.2|3.5e-08,LRR_8|PF13855.2|2.1,LRR_8|PF13855.2|4.3e+02,LRR_4|PF12799.3|8e+03,LRR_4|PF12799.3|0.48,LRR_4|PF12799.3|0.071,LRR_4|PF12799.3|9.6e-05,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|16,LRR_4|PF12799.3|0.038,LRR_1|PF00560.29|7e+03,LRR_1|PF00560.29|0.57,LRR_1|PF00560.29|4e+03,LRR_1|PF00560.29|0.079,LRR_1|PF00560.29|1.6,LRR_1|PF00560.29|25,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|2.8e+03,LRR_1|PF00560.29|19 R_Transcript_217352:1-993(+)
CTCCAAGATTTGAAAAGTATAAGAAAAACCAACCAATATATTTCAAAAAACATCAATTTACAAAACAAAAAAGAGGGAGACGTAATGATGAAGTACTCGCAATGGCTTTATGGATATTTTTCTTTCATCTTCCTGCTGATATGGCTTTGCTTCACTGCAAATTATATCAGAACGAATGCCCAACTCCTCCCTGAAAACGAAGTGAAATCTCTACAAATTATTTCCACCAAATTGAAGAATTCACACTGGAATTTAGTCAGTAAAACTTCTTGCAACAATGGAGGTCAAAGCTTCAATCAAAATATCTCACTGAGCATTCTCAGTCACGTTACCTGTAATTGTTCATTCAATCAAGGAAATATCTGCCATGTCACTAATATTCTGTTGAAGGGTCTTAATCTTACAGGAGTATTCCCTGAAGAGTTGGGAAACCTTACTCACCTGCAGGAACTTGATCTCTCTAGAAACTATATCAATGGAAGTATCCCCAAAAGTCTTGCCAATACCCCCCTTGTCACTTTGGCACTTCTTGGAAATCGGATCACTGGTCTGATTCCAGATGAAATAGGACAAATCACTACACTTGAAAAGTTGGACGTAGAAGACAACCAACTTGAAGGAAAGTTACCACCAAGTTTGGGAAATTTGAAAAGTTTGAGAACAATGGTACTGTCCGGAAACAACTTTACCGGAACAATACCAGAAACATTTGGCAATCTAAGGAACCTAACAGAACTAAGGGCTAATGGAAACAGCATATCTGGGAAGATACCTGATTTTATCGGCAATTGGACAAACATTACCATACTGGAAATGCAAGGAACGTCTATGGAAGGACCTATTCCATCTAGCTTCTCTCTTTTGACAAACTTGGAAACTCTGAGGATATCTGATCTGATCAATACGACAAGCATGGCTTTCCCAAACCTGACGGGCATGATAAATTTACAGCGCCTGGTACTCAGGAATTGCTTCATTTCAGATCAAATCCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_217352.p1 GENE.R_Transcript_217352~~R_Transcript_217352.p1 ORF type:internal len:332 (+),score=29.20,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.13,LRR_8|PF13855.2|3.5e-08,LRR_8|PF13855.2|2.1,LRR_8|PF13855.2|4.3e+02,LRR_4|PF12799.3|8e+03,LRR_4|PF12799.3|0.48,LRR_4|PF12799.3|0.071,LRR_4|PF12799.3|9.6e-05,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|16,LRR_4|PF12799.3|0.038,LRR_1|PF00560.29|7e+03,LRR_1|PF00560.29|0.57,LRR_1|PF00560.29|4e+03,LRR_1|PF00560.29|0.079,LRR_1|PF00560.29|1.6,LRR_1|PF00560.29|25,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|2.8e+03,LRR_1|PF00560.29|19 R_Transcript_217352:1-993(+)
LQDLKSIRKTNQYISKNINLQNKKEGDVMMKYSQWLYGYFSFIFLLIWLCFTANYIRTNAQLLPENEVKSLQIISTKLKNSHWNLVSKTSCNNGGQSFNQNISLSILSHVTCNCSFNQGNICHVTNILLKGLNLTGVFPEELGNLTHLQELDLSRNYINGSIPKSLANTPLVTLALLGNRITGLIPDEIGQITTLEKLDVEDNQLEGKLPPSLGNLKSLRTMVLSGNNFTGTIPETFGNLRNLTELRANGNSISGKIPDFIGNWTNITILEMQGTSMEGPIPSSFSLLTNLETLRISDLINTTSMAFPNLTGMINLQRLVLRNCFISDQIP

Click here to download the sequence:
Link to NCBI Protein BLAST