Transcript Information: R_Transcript_217471.p1


Annotated TAIR IDAT1G12760.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4348728-4350512 | Forward length=408
E-Value4.3E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.866309285416
Replicate 248.311875715171
Replicate 358.712414809556
Condition 2: 8 Hour
Replicate 160.858072101891
Replicate 282.713553218366
Replicate 390.009078877307
Condition 3: 24 Hour
Replicate 161.740899049263
Replicate 251.444426684089
Replicate 363.803721672242


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_217471.p1 GENE.R_Transcript_217471~~R_Transcript_217471.p1 ORF type:complete len:412 (+),score=52.28,zf-RING_2|PF13639.2|9.4e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|2.7e-09,zf-C3HC4|PF00097.21|1.4e+04,zf-C3HC4|PF00097.21|4.3e-07,zf-rbx1|PF12678.3|2.1e-05 R_Transcript_217471:284-1519(+)
ATGTCCACCACCCCTCAACATGTGGAAACCAATTCCACAACCCCATTACTAACCCCAACCCAATCCTCAACAGGAGACCGATCATTCCGGTCACGAAGCCGGAGATTCTCCAGGAGAGCCGGTCTCAGAGGAGCGGCGAGGTTTCTTCGGCGAGCGAACAGTCGAGGAGGTGGCATGATGACGGAACAATCGGTTAGGGTTAGAGAAGTTGCAGCTCAACAAATCGAAGAAAGGCAAAGCGATTGGGCTTATTCTACTCCGATTGTCGTTCTTGATTTGCTTTGGAACACGATTTTCGTTTTGGTTGCTATCGTAATGTTGATTTTGAGCAGAGATGAAACGACATCGGTTCCTTTAAGGTTATGGCTTGTTGGGTATGGGGTCCAGTGTGTCTTGCATATGGTTTGTGTCTGTGTTGAGTATGCTAGGAGAAGGGAGTTGAGTAATGCTGCCGGGGGAGGTGTTAGGAATGGTGGATGGAGTGTTATCGGGAATGGGAATTCGGCTCCTGGTTTGGGTTTGAATTCGGGGTCGAATCGGTCTAATTACTCCAATTCGAGCTCCAATTCTAGCTCTTCGGCTAGTATGGATGGGGATTATGTGGAGTTTGCATCAGAGCGCCGTGTCGATGAGGATAACACTAGTGTTGCAAAACATCTGGAGTCGGCAAATACAATGTTTTCCTTTATATGGTGGATCATTGGATTCTATTGGGTATCCTCTGGTGGGCAAAATCTAGCAGATGATGCACCAAAGCTGTACTGGCTCACAATTACATTTCTGGCGTTTGATGTGTTCTTTGTTGTAATTTGTGTTGCCGTGGCTTGCATCATTGGCATTGCTGTCTGCTGTTGTCTTCCATGTATCATTGCAATCCTCTATGCTGTGGCAGATCAGGAAGGAGCTACTAGAGAGGATATTGAGCGGCTGCCGAGATACAAGTTCAGGAGATTAGGCGGTGGTGAAAAAGAAAGTGGTGAAATACAGGAATCATTTACTGCAGTTATGACTGAATGCGACACTGACACCCCCATTGAACATGTTCTTTCCTTAGAGGATGCTGAGTGCTGCATATGCCTTTCTGCATATGATGATGGGAATGAACTTCGTGAACTTCCCTGCCGGCACCATTTCCACTCACCTTGTATAGACAAATGGCTACACATCAATGCAACCTGTCCCCTCTGCAAATACAACATATTGAAGAATGGTAACCAGAGCAGTGACGAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_217471.p1 GENE.R_Transcript_217471~~R_Transcript_217471.p1 ORF type:complete len:412 (+),score=52.28,zf-RING_2|PF13639.2|9.4e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|2.7e-09,zf-C3HC4|PF00097.21|1.4e+04,zf-C3HC4|PF00097.21|4.3e-07,zf-rbx1|PF12678.3|2.1e-05 R_Transcript_217471:284-1519(+)
MSTTPQHVETNSTTPLLTPTQSSTGDRSFRSRSRRFSRRAGLRGAARFLRRANSRGGGMMTEQSVRVREVAAQQIEERQSDWAYSTPIVVLDLLWNTIFVLVAIVMLILSRDETTSVPLRLWLVGYGVQCVLHMVCVCVEYARRRELSNAAGGGVRNGGWSVIGNGNSAPGLGLNSGSNRSNYSNSSSNSSSSASMDGDYVEFASERRVDEDNTSVAKHLESANTMFSFIWWIIGFYWVSSGGQNLADDAPKLYWLTITFLAFDVFFVVICVAVACIIGIAVCCCLPCIIAILYAVADQEGATREDIERLPRYKFRRLGGGEKESGEIQESFTAVMTECDTDTPIEHVLSLEDAECCICLSAYDDGNELRELPCRHHFHSPCIDKWLHINATCPLCKYNILKNGNQSSDEV*

Click here to download the sequence:
Link to NCBI Protein BLAST