Transcript Information: R_Transcript_217900.p1


Annotated TAIR IDAT1G07120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2184874-2186580 | Reverse length=392
E-Value4.7E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1211892478329
Replicate 20.92858331079451
Replicate 30.67538292666789
Condition 2: 8 Hour
Replicate 10.78210379438375
Replicate 20.82411112436802
Replicate 30.75817538217833
Condition 3: 24 Hour
Replicate 11.2973699416147
Replicate 20.86703720454358
Replicate 30.96800659548932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_217900.p1 GENE.R_Transcript_217900~~R_Transcript_217900.p1 ORF type:complete len:407 (+),score=97.87 R_Transcript_217900:89-1309(+)
ATGCAAAGGGGAAACAGCTCAGAAATCACCTTCCTAGTGGAAGATCTAGAAGCTGTTCTGGAGATGAACAGGTTATTGGAGAAGGAGAATCAAGAATTGAAACATGAAGTTTCTCGTCTAAAAGCTCAAGTTGCTTCTCTCAAAGCTCATGATCTTGAGAGGAAATCCATCCTCTGGAAGAAACTTCAACAACAACAAAAACAAGCAACTACAGAAACAACAACTGCAGAACAGAATTCAGTACTGTCAGAGCCTGCAAGCAAGAAATTGACAGCAGAACCAACAACAGCAACAAAGAAGTTAAACCAGCAAAACCCGTTGCCAAAAGGGCCGCCGCCACCACCACCACCACTGCCATCGAAAGCATTGGTGGGTTCGAGATTCACAGTCAAGCGAATGCCTGAAGTGATCGAATTTTATCGATACCTCAACAAAAGAAATACTCAGCTGGAAAACAGAACAAATGTAACAGGAACTTCTCCAGGGGAAGGGAATAATCCTAGGAACATGATTGGTGAAATCGAGAACCGATCAACATACCTTTCTGCTGTGAAGTCAGATGTGGAAACACAGAGAGAATTTATCCTGTTCTTGATCAGAAAAGTAGAAACAGCAGCCTTTAAGGAGATCTCAGCAGTGGAATCATTTGTAAAATGGCTGGATGAGGAACTTTCATGTCTAGTAGATGAGAGAGCTGTGTTGAAGCATTTCCCACAATGGCCAGAAAGAAAGGCTGATGCTTTCAGAGAAGCTGCTTGCACCTACCGCGATTTCAAGATCTTAGAGTCAGAAGTGGTTTCTTACAAAGACAATCCCAAGCTACCCTTGTCACAAACACTTGGACATATACAAGCCTTGCAAGACAGACTAGAAAGGGCAATTAACAACATTGAAAGATCAAGAGAAGGGACATGTAAGAGATACAAGGAACTGCAGATCCCTTGGGATTGGATGCAGGACACAGGGTTACTTGGTCAGGTCAAATTAAGTTCATTAAAGCTTGCAAAAGAATACTTGAGACGAGTTATCAAAGAACTACAGGGTCCCAAATGCCCCAAATTAGAGGATATCATGCTCCAAGGTGCTCGATTTGCTTATCGAGTTCATCAGTTTGCAGGTGGTTTTGATGTAGATACCAAGCGTTTATTTGAAGATCTTAAACAAATACATTCTAGCAAATTGTTACAAGATCATCAAGCTCCATCTTACATAAATGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_217900.p1 GENE.R_Transcript_217900~~R_Transcript_217900.p1 ORF type:complete len:407 (+),score=97.87 R_Transcript_217900:89-1309(+)
MQRGNSSEITFLVEDLEAVLEMNRLLEKENQELKHEVSRLKAQVASLKAHDLERKSILWKKLQQQQKQATTETTTAEQNSVLSEPASKKLTAEPTTATKKLNQQNPLPKGPPPPPPPLPSKALVGSRFTVKRMPEVIEFYRYLNKRNTQLENRTNVTGTSPGEGNNPRNMIGEIENRSTYLSAVKSDVETQREFILFLIRKVETAAFKEISAVESFVKWLDEELSCLVDERAVLKHFPQWPERKADAFREAACTYRDFKILESEVVSYKDNPKLPLSQTLGHIQALQDRLERAINNIERSREGTCKRYKELQIPWDWMQDTGLLGQVKLSSLKLAKEYLRRVIKELQGPKCPKLEDIMLQGARFAYRVHQFAGGFDVDTKRLFEDLKQIHSSKLLQDHQAPSYING*

Click here to download the sequence:
Link to NCBI Protein BLAST