Transcript Information: R_Transcript_21798.p1


Annotated TAIR IDAT1G50490.1
Annotated Gene Nameubiquitin-conjugating enzyme 20
Annotated Gene Symbol(s)UBC20
Annotation TypeOrtholog
Chromosome Positionchr1:18705005-18706303 | Reverse length=180
E-Value8.3E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1109.6208898015
Replicate 2103.08353142239
Replicate 3120.8751012136
Condition 2: 8 Hour
Replicate 161.560507918215
Replicate 248.385410989684
Replicate 368.709486529148
Condition 3: 24 Hour
Replicate 1129.44571532909
Replicate 2128.59337387049
Replicate 3133.79941509165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21798.p1 GENE.R_Transcript_21798~~R_Transcript_21798.p1 ORF type:complete len:177 (+),score=36.27,UQ_con|PF00179.22|8.8e-48 R_Transcript_21798:232-762(+)
ATGGCGACTGTCAACAACACTCCGGTGGCTTCTCCGGCAGGTATTCCGACCAAACAGAATGTTCCGGCGAACAAGACTGTTGACACTCAATCTGTTCTCAAAAGGTTGCAGTCTGAATTAATGTCTCTTATGATGAGTGGTGATCCAGGAATATCAGCATTCCCAGAGGAAGACAACATATTCAGTTGGAAGGGAACAATTCAAGGGAGCAAAGACACAGTCTTTGAAGGCACAGAATACAAATTGTCCCTCAATTTTCCTGCTGATTATCCCTTTAAGCCTCCCAAGGTTAAGTTCGAGACCGGTTGCTTTCACCCGAATGTTGATGTTTATGGTAACATCTGCTTGGATATTCTTCAGGATAAGTGGTCTTCTGCCTATGATGTGAGAACGATATTGCTTTCTATTCAAAGTCTTCTTGGAGAGCCAAACACCAGCTCACCTTTAAACACACAAGCAGCAGCACTTTGGAGCAATCAAGAAGAGTACAGGAAAATGGTTGAGAAGCTTTACAAGCCAACAACAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21798.p1 GENE.R_Transcript_21798~~R_Transcript_21798.p1 ORF type:complete len:177 (+),score=36.27,UQ_con|PF00179.22|8.8e-48 R_Transcript_21798:232-762(+)
MATVNNTPVASPAGIPTKQNVPANKTVDTQSVLKRLQSELMSLMMSGDPGISAFPEEDNIFSWKGTIQGSKDTVFEGTEYKLSLNFPADYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAALWSNQEEYRKMVEKLYKPTTA*

Click here to download the sequence:
Link to NCBI Protein BLAST