Transcript Information: R_Transcript_218070.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50985924454522
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.12492112760439
Replicate 30.10140564592395
Condition 3: 24 Hour
Replicate 10.25651181260005
Replicate 20.12321373681887
Replicate 30.36683303944521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_218070.p1 GENE.R_Transcript_218070~~R_Transcript_218070.p1 ORF type:3prime_partial len:179 (+),score=13.98,PPR_1|PF12854.3|4.2e-08,PPR_1|PF12854.3|17,PPR_2|PF13041.2|7.1e+03,PPR_2|PF13041.2|0.0059,PPR_2|PF13041.2|5.3e-05 R_Transcript_218070:29-562(+)
ATGCGATTGCTTGAGTTCTCTTTGATGAATGTTTCAATTGTCGCATCCCATGCTGGTAACCATCTTCGCCTTCATTTTCCCAGTTCCTTTAATTATTTATTACTATGTCATTCTTTTCAATTTCATCCTTGCCGAAATTACTCAAATGGTAGAACTCAATTTTTATTGAAATTTGTGAGAAAGAAGTTCAATCTAGGGTTTAGAGACCTTGATTACCCCGTCTCTCTTTTCCATTGCATCACCTCTTTGCGTCCCCTCCCTTCCATCATTGATTTCAACCACCTCTTTTCCTCCATTCTCAAGACTAAGAGACCCAGAATTGAACTTGATAAATACCACCTTGTTATTGCTCTCTCCAAACAGTTGGACTTTCTTAGTAATGGTAATGGTTTTGGTGTTCGTCCCGATTGCTATTCTTTTAGCATCCTGATCAATTGTTACTGCCGCTTGGGTCGAGTTGATTTGGGCTTCTCTCTTTTGGGTACTCTTATTAAGCTTGGGTTTGTACCTGATCGTGTCGTCTTCACTACCTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_218070.p1 GENE.R_Transcript_218070~~R_Transcript_218070.p1 ORF type:3prime_partial len:179 (+),score=13.98,PPR_1|PF12854.3|4.2e-08,PPR_1|PF12854.3|17,PPR_2|PF13041.2|7.1e+03,PPR_2|PF13041.2|0.0059,PPR_2|PF13041.2|5.3e-05 R_Transcript_218070:29-562(+)
MRLLEFSLMNVSIVASHAGNHLRLHFPSSFNYLLLCHSFQFHPCRNYSNGRTQFLLKFVRKKFNLGFRDLDYPVSLFHCITSLRPLPSIIDFNHLFSSILKTKRPRIELDKYHLVIALSKQLDFLSNGNGFGVRPDCYSFSILINCYCRLGRVDLGFSLLGTLIKLGFVPDRVVFTTL

Click here to download the sequence:
Link to NCBI Protein BLAST