Transcript Information: R_Transcript_218093.p1


Annotated TAIR IDAT4G10160.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:6336023-6337301 | Forward length=225
E-Value3.7E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3689720716039
Replicate 21.1810418984168
Replicate 30.42950132992786
Condition 2: 8 Hour
Replicate 12.142513182884
Replicate 20.41926653452223
Replicate 31.2479232301516
Condition 3: 24 Hour
Replicate 11.5783492469047
Replicate 20.96491757646276
Replicate 31.3679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_218093.p1 GENE.R_Transcript_218093~~R_Transcript_218093.p1 ORF type:complete len:160 (+),score=13.81,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|3e-11,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|8.2e-10,zf-rbx1|PF12678.3|1.3e-08,zf-C3HC4_2|PF13923.2|3.2e+02,zf-C3HC4_2|PF13923.2|6.8e-07 R_Transcript_218093:161-640(+)
ATGAGCAACAACATCAGCCCAAGCTTTGACCCTTCAGACACCATCCAAGGTGATGACAATCACCACTATGGTGTTATAATGTTCATAGTGGTGCTACTCATAATCGTCTTCATCACTGTTTTCTCATTCATCTGTACCCGGATCCATCTCGGGTTAACCCGGCCCAACCCCACTCGAAGCTCGACCGCCTCGAATATGGATCAGGATCCGTTTAACTTGGGGCTCGAGGAGGCCACCCTTGAGAGCTACCCAAAGCTGCTTTACTCACAAGCAAAAGTACAACTACTTGACAAAGCATCATGTAATTCTTGTAATTGTTGTTGCTCCATTTGCTTAGGGGATTACAAGGAAAATGATGTGTTGAGATTGTTGCCTGATTGTGGTCATTTGTTCCATCAAAAATGTGTAGATTCTTGGTTGAAATCAAATCCTACTTGTCCTCTTTGTAGGAATTCACCTCTTCCTTCTCCTTTAAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_218093.p1 GENE.R_Transcript_218093~~R_Transcript_218093.p1 ORF type:complete len:160 (+),score=13.81,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|3e-11,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|8.2e-10,zf-rbx1|PF12678.3|1.3e-08,zf-C3HC4_2|PF13923.2|3.2e+02,zf-C3HC4_2|PF13923.2|6.8e-07 R_Transcript_218093:161-640(+)
MSNNISPSFDPSDTIQGDDNHHYGVIMFIVVLLIIVFITVFSFICTRIHLGLTRPNPTRSSTASNMDQDPFNLGLEEATLESYPKLLYSQAKVQLLDKASCNSCNCCCSICLGDYKENDVLRLLPDCGHLFHQKCVDSWLKSNPTCPLCRNSPLPSPLR*

Click here to download the sequence:
Link to NCBI Protein BLAST