Transcript Information: R_Transcript_218288.p1


Annotated TAIR IDAT3G29785.1
Annotated Gene Nameunknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:11612357-11612686 | Reverse length=109
E-Value7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51957685885957
Replicate 20.77956560951602
Replicate 30.45359876428025
Condition 2: 8 Hour
Replicate 10.48486861281674
Replicate 20.30441794585772
Replicate 30.87612972053848
Condition 3: 24 Hour
Replicate 10.85239383271179
Replicate 20.5732183622551
Replicate 30.67721858560945


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_218288.p1 GENE.R_Transcript_218288~~R_Transcript_218288.p1 ORF type:complete len:808 (+),score=168.47,UBN2_2|PF14227.2|3.2e-33,rve|PF00665.22|4.7e+03,rve|PF00665.22|2.2e-23,UBN2|PF14223.2|2e-19,gag_pre-integrs|PF13976.2|2.7e-12 R_Transcript_218288:198-2621(+)
ATGGAAAGTTCGAAGTTAGGGATTGAGAAGTTTGATGGATCCGATTTCGGTTTCTGGAAGATGCAGATTGAAGATTATCTGTACCAGAAAGATCTTCACGAACCCTTAACTGGGGTGAAGCCGGAATCCATGACGGAGGAGCAGTGGAAGCTCAAGGATCGGCAAGCTCTAGGGCTGATCCGGTTGACGCTATCCAGAAACGTGGCGTTCAATATCGTCAAGGAGAAGACAACTGCCGATCTATTGAAGGCGTTGTCAAATATGTACGAAAAACCTTCGGCGATGAACAAGGTTTACTTGATGCGTAGATTGTTCAATTTACAGATGCCTGAAGGTGGATCTGTTGCGGATCATATTAATGAATTTAATATGATCGTTAGTCAACTCGGTTCTGTTGAAATTAATTTCGAAGATGAAATTAAAGCGTTGATTTTGATGTCATCTTTACCCGAGTCTTGGGATACTGTTGTTGCTGCGATTAGCGGTTCCCGTGGATCTGAGAAGCTGAAGTTTGATGAAATCCGAGATGTTGTTCTCAGCGAAAGTATTCGCAAACGAGAAGTGGGAGATTCATCAGGCAGCGCTCTTAGTGTTGACCGAAGGGGGAGAAGCAAGTCGAAGGGCCAACATCAACATGGCCGATCAAAATCAAAGAATAGAGGAAAGTCTCCGAACAAATCCAACGTGACTTGTTGGAACTGTGGAGATAAAGGCCACTTTCGAACGAGTTGCACGAAACCAAAGAAGAAGCAGAGTCACAAATCTGGAGATGATAGTGATTCTGTGAATTCGGCAGAAGACATTGGGGATTCTCTAATCCTTAGTGTGGACAGCCCGGTTGAATCCTGGATTTTGGATTCAGGTGCATCTTTTCATTCGTCTCCAAGCAAAAAATTATTCCAAAATTTTAAATCTGGAAATTTCGGAAAGGTGTATCTTGCTGACAACAAAGCCTTGGAGATTGAAGGAAAGGGCGATGTCTGCATTAAGACCCCATCGGGAAACCAGTGGACATTAGAGAATGTCAGATATATTCCTGGGCTCAAGAAGAATCTGATCTCGGTTGGTCAGTTGGATAGCACGGGCTATGCAGCAGAGTTTGGGAAAGGTTCGTGGAAGATTGTAAAAGGTGCTATGGTTGTTGCTCGTGGCACAAAATCTGGAACCTTGTACACCACTGCAGGGTGTATTAACATGGCTGTTGTTGCTGATAGTGCTTCTGGTTCATGTCTGTGGCACAACAGACTTGGACACATGAGTGCCAAAGGAATGAAGATGCTGGTTGCAAAAGGAGCTTTAGAGGGTCTGAAGTCCGTTGATATGGGTCTTTGTGAAAGCTGTGTTATGGGCAAACAGAAACGAGTTAGCTTCACAAAGACTCCGAGAGAACCGAAGAAAGTGCGGTTAGAAATGGTCCATACAGATGTTTGGGGACCATCTCCGGTTTCATCACTTGGAGGATCCAGGTTCTATGTCACCTTCATTGATGACTTCAGCAGGAAGGTATGGGTTTACTTCTTGAAGCATAAATCAGATGTGTTTGCAACTTTCAAGAAGTGGAAAGCTGAAGTTGAAAATCAGACAGGGCTGAAAATCAAATGCCTGAGGTCTGATAATGGAGGAGAGTATGACAAGTCAGAGTTTAAGGCATTCTGTGCTGCTGAGGGAATCAGATTGATGAGGACAGTTCCCGGGAAGGCAAGACAGAATGGAGTTGCTGAAAGGATGAACAGAACATTGAACGAGCGTGCAAGGAGCATGAGGATACATTGCGGGCTGCCCAAAATGTTCTGGGCAGATGCTGTGAGCACTGCTGCATACTTGATCAATAGGGGACCATCAGTTCCCTTGGGGTTCAAGATTCCAGAGGAAGTGTGGACAGAAAAGGAACTCAAGTACTCACACTTGAGAACTTTTGGTTGCACTGCTTATGTTCATGTTGATCCAGAGAAGCGAGACAAACTTGATGCTAAGGCTGTGAAGTGTTACTTCATAGGTTATGGCTCTGACATGTTTGGTTACAGGTTTTGGGATGACAAGAACAGAAAGATCCTAAGACACTGTGACGTGACATTTGATGAGTCTGTCTTGTACAAGGACAGAGATCAGAACGTTTCAGAAACTACAAAGCAAGTGGGAGTTGAGGTTGAGTTGGCGAAGAATACACCGAGAGATGTCGCAGCAGAAACTCAACCAACTCCAGACATTGTTGCTGAAGAACCTGAGGTGGAGCAAGTGACACCTGAACAGGTGTTGAAAAGATCATCCAGAATTATCAGAGCACCAGATAGGTATTCACCTTCATTACACTATCTGTTGTTGACTGATGAAGGGGAACCCGAGTCTTTTGATGAGGCCCTACAGGTGGAGGATTCAATCAAGTGGGAGCAAGCCATGGATGATGAGATGAGCTCACTTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_218288.p1 GENE.R_Transcript_218288~~R_Transcript_218288.p1 ORF type:complete len:808 (+),score=168.47,UBN2_2|PF14227.2|3.2e-33,rve|PF00665.22|4.7e+03,rve|PF00665.22|2.2e-23,UBN2|PF14223.2|2e-19,gag_pre-integrs|PF13976.2|2.7e-12 R_Transcript_218288:198-2621(+)
MESSKLGIEKFDGSDFGFWKMQIEDYLYQKDLHEPLTGVKPESMTEEQWKLKDRQALGLIRLTLSRNVAFNIVKEKTTADLLKALSNMYEKPSAMNKVYLMRRLFNLQMPEGGSVADHINEFNMIVSQLGSVEINFEDEIKALILMSSLPESWDTVVAAISGSRGSEKLKFDEIRDVVLSESIRKREVGDSSGSALSVDRRGRSKSKGQHQHGRSKSKNRGKSPNKSNVTCWNCGDKGHFRTSCTKPKKKQSHKSGDDSDSVNSAEDIGDSLILSVDSPVESWILDSGASFHSSPSKKLFQNFKSGNFGKVYLADNKALEIEGKGDVCIKTPSGNQWTLENVRYIPGLKKNLISVGQLDSTGYAAEFGKGSWKIVKGAMVVARGTKSGTLYTTAGCINMAVVADSASGSCLWHNRLGHMSAKGMKMLVAKGALEGLKSVDMGLCESCVMGKQKRVSFTKTPREPKKVRLEMVHTDVWGPSPVSSLGGSRFYVTFIDDFSRKVWVYFLKHKSDVFATFKKWKAEVENQTGLKIKCLRSDNGGEYDKSEFKAFCAAEGIRLMRTVPGKARQNGVAERMNRTLNERARSMRIHCGLPKMFWADAVSTAAYLINRGPSVPLGFKIPEEVWTEKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDDKNRKILRHCDVTFDESVLYKDRDQNVSETTKQVGVEVELAKNTPRDVAAETQPTPDIVAEEPEVEQVTPEQVLKRSSRIIRAPDRYSPSLHYLLLTDEGEPESFDEALQVEDSIKWEQAMDDEMSSLE*

Click here to download the sequence:
Link to NCBI Protein BLAST