Transcript Information: R_Transcript_21848.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value5.9E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.513088827099
Replicate 21.6736181491252
Replicate 30.4979725564381
Condition 2: 8 Hour
Replicate 11.951771843621
Replicate 21.7823891322684
Replicate 31.5784009235119
Condition 3: 24 Hour
Replicate 13.3272184387977
Replicate 21.1187450161887
Replicate 32.5377048912345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21848.p1 GENE.R_Transcript_21848~~R_Transcript_21848.p1 ORF type:complete len:138 (+),score=18.60,DUF971|PF06155.8|6.1e-21 R_Transcript_21848:150-563(+)
ATGGCGATGTTGGCGATACGGAAGGTTTTTCGAAGCATTCATGTCGCTACTGATGCTCCTCGCCTTACCAGATTTGCTCTCCATCCACCTAAATGTGTGGAGGTTGAATTTGCTGATGGCAGTACATTCAGTCTACCAGCTGAATTTCTCAGAATATACAGCCCTGCCGCTGACAGCAAGATACGTTCCATTGGGGGTGAAAAGGTAATATTTGGGCGTCGTCATGTTGGAATAATGTCTGCAGAACCTGTGGGGAACTATGGGGTAAGGTTGCTCTTCGATGATTTGCACAAGACAGGGATTTACACATGGGATTACTTTTATTATCTAGGAAGCAATAAGTTCATGCTGATGCGAAATTACATCAAAACATTGAAGAAGCATGGTCTCAGCCGGGATCCAAAAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21848.p1 GENE.R_Transcript_21848~~R_Transcript_21848.p1 ORF type:complete len:138 (+),score=18.60,DUF971|PF06155.8|6.1e-21 R_Transcript_21848:150-563(+)
MAMLAIRKVFRSIHVATDAPRLTRFALHPPKCVEVEFADGSTFSLPAEFLRIYSPAADSKIRSIGGEKVIFGRRHVGIMSAEPVGNYGVRLLFDDLHKTGIYTWDYFYYLGSNKFMLMRNYIKTLKKHGLSRDPKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST