Transcript Information: R_Transcript_21850.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value3.6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7040502983496
Replicate 23.0619604773768
Replicate 34.0564014493187
Condition 2: 8 Hour
Replicate 14.0809774912075
Replicate 22.5621843776358
Replicate 33.4034269913226
Condition 3: 24 Hour
Replicate 12.6305820781744
Replicate 22.9866496414323
Replicate 34.7879354002588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21850.p1 GENE.R_Transcript_21850~~R_Transcript_21850.p1 ORF type:complete len:96 (+),score=5.69,DUF971|PF06155.8|4.2e-12 R_Transcript_21850:287-574(+)
ATGATTCCATTAGTCATTGGAAAGAGATCTTGTACGTGTTGTAGCCATTCAGTGTTCGTCATTGCTGATCTCATGCAGGTAATATTTGGGCGTCGTCATGTTGGAATAATGTCTGCAGAACCTGTGGGGAACTATGGGGTAAGGTTGCTCTTCGATGATTTGCACAAGACAGGGATTTACACATGGGATTACTTTTATTATCTAGGAAGCAATAAGTTCATGCTGATGCGAAATTACATCAAAACATTGAAGAAGCATGGTCTCAGCCGGGATCCAAAAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21850.p1 GENE.R_Transcript_21850~~R_Transcript_21850.p1 ORF type:complete len:96 (+),score=5.69,DUF971|PF06155.8|4.2e-12 R_Transcript_21850:287-574(+)
MIPLVIGKRSCTCCSHSVFVIADLMQVIFGRRHVGIMSAEPVGNYGVRLLFDDLHKTGIYTWDYFYYLGSNKFMLMRNYIKTLKKHGLSRDPKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST