Transcript Information: R_Transcript_218596.p1


Annotated TAIR IDATMG00750.1
Annotated Gene NameGAG/POL/ENV polyprotein
Annotated Gene Symbol(s)ORF119
Annotation TypeHomolog
Chromosome PositionchrM:220830-221189 | Forward length=119
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.065658132930643
Replicate 20.22657878147084
Replicate 30.24719501003042
Condition 2: 8 Hour
Replicate 10.17615730177874
Replicate 20.48260896060113
Replicate 30.19588069014806
Condition 3: 24 Hour
Replicate 10.082582040387425
Replicate 20
Replicate 30.078732750672293


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_218596.p1 GENE.R_Transcript_218596~~R_Transcript_218596.p1 ORF type:5prime_partial len:278 (+),score=56.72,rve|PF00665.22|1.2e-20 R_Transcript_218596:1-834(+)
CATGAGGGTGGAGGTCACTTTGGACCTAAGAGAACAGCCCATAAGGTCCTAGAATGTGGTTTCTTTTGGCCTTCTATTCAAAAGGATGCATTTTTGTTTTGCAAAGCATGTGATCGTTGTCAAAAGATTGGCAATATAAGCAAAAGAAATGAGATGCCTTCAAATGTTTTTGTGGTTTGTGAGATTTTTGATGTTTGGGGCATTGATTTTATGGGTCCATTTCCACAGTCTTTTGGGAATTGTTACATTATTCTTGCAGTGGATTATGTGTCTAAATGGGTGGAAGCAAAGGCCACTAAAATGAATGATGCAAAAACTGTGATTAAATTTGTTAAGAGCCATATATTTGAGAGGTTTGGTGCCCCAAAGGCTATCGTTAGTGACAGAGGCACTCGTTTTTGCAATAAGATCTTTAGGGCTTTGCTGGAAAAATATCATGTGAGGCATAAAATTTCTACTGCCTATAATCCTCAAACTAGTGGTCAAGCTGAGGTTTCTAATAGAGAAGTGAAGAGCATCCTTGAGAAAATTGTGAATCCCTCTAGGAAAGATAGGAGTATGCGGTTAGGCGAAGCATTATGGGCTTATAGAACAGCTTACAAAACTCCAATTGGTATGAGTCCTTTTAGGATGTTGTTTGGAAAAGCTTGTCATTTGCCTGTGGAACTTGAGCACAAATCTTTTTCGGCGATTAAGAAATGTAGTTTGGATCTTAAGTTAGCTGGTAAAGCAAGGATGCTTCTGTTGCAAGAACTTGAGGAGTTTAGAATGGATGCTTATGAGAATGCCATGTTGTACAAGTATAGGGCAAAGCATTCCATGATAGGATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_218596.p1 GENE.R_Transcript_218596~~R_Transcript_218596.p1 ORF type:5prime_partial len:278 (+),score=56.72,rve|PF00665.22|1.2e-20 R_Transcript_218596:1-834(+)
HEGGGHFGPKRTAHKVLECGFFWPSIQKDAFLFCKACDRCQKIGNISKRNEMPSNVFVVCEIFDVWGIDFMGPFPQSFGNCYIILAVDYVSKWVEAKATKMNDAKTVIKFVKSHIFERFGAPKAIVSDRGTRFCNKIFRALLEKYHVRHKISTAYNPQTSGQAEVSNREVKSILEKIVNPSRKDRSMRLGEALWAYRTAYKTPIGMSPFRMLFGKACHLPVELEHKSFSAIKKCSLDLKLAGKARMLLLQELEEFRMDAYENAMLYKYRAKHSMIGC*

Click here to download the sequence:
Link to NCBI Protein BLAST