Transcript Information: R_Transcript_218796.p1


Annotated TAIR IDAT1G67025.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.1); Has 221 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25013344-25014435 | Reverse length=221
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27379441432078
Replicate 20
Replicate 30.34360106394229
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.090758053101935
Condition 3: 24 Hour
Replicate 10
Replicate 20.11027629445289
Replicate 30.32831557030346


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_218796.p1 GENE.R_Transcript_218796~~R_Transcript_218796.p1 ORF type:5prime_partial len:200 (+),score=22.71,WAK_assoc|PF14380.2|9.4e-11 R_Transcript_218796:3-602(+)
TTTGACGAGAGCAACTTGTTTAAGTATAAATCGCATGTTCAGAACATTAGTTTAATCCATGGTTCTGGCTGCCCTGTCAAAAATACTAGTCTCCCCTCGTTTACATGTGGAGATAACAGGAAAAATATTACAGTTTACTATGTGAAGAACGCGTCAAAGTGGATAAAGGACTCGCTTTGCACTCGTATAAATTATCCAGCACTGGTTGGACAAGAGTTGAATGATCTTAGAAGTGGTAAGGGGACACTAATGGATGTCTTTAAGCAGGAGTTTGAGGTGATTTACTCAAAGAATTATTCCAGTGCTTGTTTTGACTGTGAAAATTCTGGTGGTGTATGTGGGTCATACAATTCATCAGAGTTTGTATGCCACTGCAAGGATAGTCCTTCTCAACTCTCTTTTTGCCAGAAGTCAAAATCAGGGAAATTGAGCAGCCAAGGCCTCATTATTCTTGGATTAGGTAATTCTCTTGAGCATGTTCTCAAGAAACCTTCATGGGAGCAGGGTGAAGTTCCCTCACACTTTGTTTTCACGTGGATGGGTACTATCATGTATCAACTAACAGCAACTTTTTCAAGACGTTTATCTCTCCTTTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_218796.p1 GENE.R_Transcript_218796~~R_Transcript_218796.p1 ORF type:5prime_partial len:200 (+),score=22.71,WAK_assoc|PF14380.2|9.4e-11 R_Transcript_218796:3-602(+)
FDESNLFKYKSHVQNISLIHGSGCPVKNTSLPSFTCGDNRKNITVYYVKNASKWIKDSLCTRINYPALVGQELNDLRSGKGTLMDVFKQEFEVIYSKNYSSACFDCENSGGVCGSYNSSEFVCHCKDSPSQLSFCQKSKSGKLSSQGLIILGLGNSLEHVLKKPSWEQGEVPSHFVFTWMGTIMYQLTATFSRRLSLLL*

Click here to download the sequence:
Link to NCBI Protein BLAST