Transcript Information: R_Transcript_218884.p1


Annotated TAIR IDAT2G33730.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14265679-14267880 | Reverse length=733
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6455090009262
Replicate 21.12167214244
Replicate 31.720873442115
Condition 2: 8 Hour
Replicate 11.1445813330933
Replicate 22.3891426341167
Replicate 31.818191381007
Condition 3: 24 Hour
Replicate 11.4180949372705
Replicate 21.0677838194103
Replicate 30.84042939532327


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_218884.p1 GENE.R_Transcript_218884~~R_Transcript_218884.p1 ORF type:5prime_partial len:599 (+),score=112.12,DEAD|PF00270.25|1.6e-48,Helicase_C|PF00271.27|6.5e+03,Helicase_C|PF00271.27|2.9e+03,Helicase_C|PF00271.27|8.7e-30 R_Transcript_218884:3-1799(+)
AAAATGATGAAGAGATCTACAGAGCTCATGAAGGAGCCAGTTTTCCTAACCAAAGCACAAAGAGATCAATTATTATCATCTACCTATCTCCCTTATACAACTACAGAAAAGGATGAAAAAGAACAAAAAAACCATGAAGATCAAGAAAAGAAGATGAAAGAAGAGAAACTAACTCTTATCAAAGAGCAATATTTAGTAGGCAGACCTTCTAAGAAACCATATATCAAGCCTACCCAAAAATCTCGTTTTTCTTTTGATTGGGATTACACCAAAGAAGACACAACTTGTATTGATGAATATTATGAGATGAAGCAATGCCATGAAGCTCAGCTGTTGTTTGGCAGAGGATTTCGCGCTGGAATAGACCGTCAGGAACAGAAAAAGAAGAATGTCCATGGCAAAAGATTGTATGAATATGATCGCCGTTGGTCGGAAAAGAGTATTGAAGAGATGAATGAGAGAGATTGGAGGATCTTCAATGAACATTGCAGTATATCTTACAAGGGTAATAATAATAATGGTACTAATTCGAGGATTAGGCCAATGAGAAATTGGGAAGAAAGTAAAGTATTGAGTTCAGACCTGTTAAAAGCTGTCGAAAAAGCAGGGTATAAGACTCCAACTCCTATTCAGATGGCTGCTATTCCTTTCGGAATCCAACAACGAGACTTCATAGCAGTTGCACAAACTGGGTCAGGGAAGACCGCGGCCTTTGTTATTCCTATGTTGGATTACATCTCGAGGCTGGGGTGGAGGTTGCCCTGCATTAGTACTGAAGAAGATGGGCTCGAGAATGAGGGTCCTTATGCTGTCGTTTTAGCACCTACTCGAGAGCTAGCCCTGCAGATTGAGCGAGAAGCTGTCAAATTTGCGCGTTATCTAGAAAGAAAAATCAGGGTTGTGGCAATTGTTGGAGGACAGTCAATTGAGGAGCAAGGGTTCAAAATAAGGCAGGGGTGTGATGTTGTTGTTGCCACTCCTGGACGTTTGTTGGACTGCCTTGAACGTCGTTATGTTGTTCTGAACCAGTGCAATTATGTTGTTCTTGATGAGGCTGATCGGATGATTGACATGGGTTTCGAGAACCAGGTGTTGGGTATATTGGACTCCATGTCTAGCAGCAATTCGAGCCCTGATACTAATCGAACCACCTTTATGTTTAGTGCCACTATGCCCCCTTCTGTAGAGCGGCTAGCCAGGAAGAACCTTAGAAATCCTGTGATGATAACTGTTGGCATGGCTGGGAAACCAACTGAACTCATCACACAGAATGTGATTATGTTGAAGGAATCCGAAAAATTTTCAAGGTTGAAAAAGTTGTTGAATGATGAATTAGGTAACCATAAGACGGCTATTGTGTTTGTCAACACTAGGATGAATGCGGATTTGGTTTCTGACAAGCTAGACAAGGCTGGTTTTCAAGTGGCAATGTTACGTGGTGGGAAATCACAGGACCAACGAGAAGTTAGCCTTGAAGGCTTCAGAACTAGGAGGTATAATGTACTTGTTGCGTCAGATGTTGCAGGACGAGGCATAGATGTACCTGATGTTTCTCATGTCGTGAACTATGATATGCCTAGCAAGATCGAGATGTATACTCATCGAATTGGGCGTACTGGGAGAGCCGGGAAGAATGGTGTGGCTACAACATTCTTGACTTTGAATGATACTGGTGTGTTCTATGATCTTAAGCAGGTGCTTATTCAGAGTCACAGTCATGTTCCCCCTGAACTTGCCAGGCATGAGGCTTCGAGATTCAAACCTGGAACAATTCCTGAACTTGTTTTTGCACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_218884.p1 GENE.R_Transcript_218884~~R_Transcript_218884.p1 ORF type:5prime_partial len:599 (+),score=112.12,DEAD|PF00270.25|1.6e-48,Helicase_C|PF00271.27|6.5e+03,Helicase_C|PF00271.27|2.9e+03,Helicase_C|PF00271.27|8.7e-30 R_Transcript_218884:3-1799(+)
KMMKRSTELMKEPVFLTKAQRDQLLSSTYLPYTTTEKDEKEQKNHEDQEKKMKEEKLTLIKEQYLVGRPSKKPYIKPTQKSRFSFDWDYTKEDTTCIDEYYEMKQCHEAQLLFGRGFRAGIDRQEQKKKNVHGKRLYEYDRRWSEKSIEEMNERDWRIFNEHCSISYKGNNNNGTNSRIRPMRNWEESKVLSSDLLKAVEKAGYKTPTPIQMAAIPFGIQQRDFIAVAQTGSGKTAAFVIPMLDYISRLGWRLPCISTEEDGLENEGPYAVVLAPTRELALQIEREAVKFARYLERKIRVVAIVGGQSIEEQGFKIRQGCDVVVATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFENQVLGILDSMSSSNSSPDTNRTTFMFSATMPPSVERLARKNLRNPVMITVGMAGKPTELITQNVIMLKESEKFSRLKKLLNDELGNHKTAIVFVNTRMNADLVSDKLDKAGFQVAMLRGGKSQDQREVSLEGFRTRRYNVLVASDVAGRGIDVPDVSHVVNYDMPSKIEMYTHRIGRTGRAGKNGVATTFLTLNDTGVFYDLKQVLIQSHSHVPPELARHEASRFKPGTIPELVFAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST