Transcript Information: R_Transcript_219070.p1


Annotated TAIR IDAT5G38190.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G32010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15234188-15237906 | Forward length=953
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33594406665127
Replicate 20.38643497698708
Replicate 30.4215963974752
Condition 2: 8 Hour
Replicate 10.90132018210719
Replicate 20.68591662089526
Replicate 31.4476744666566
Condition 3: 24 Hour
Replicate 10.98591810180324
Replicate 20.81185002051205
Replicate 30.26856079370426


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219070.p1 GENE.R_Transcript_219070~~R_Transcript_219070.p1 ORF type:complete len:163 (+),score=21.27 R_Transcript_219070:132-620(+)
ATGGGTAAAAAGTCTTGTGCTCAAAAGGGACCTATTTCTAGGGCTAGAAATGAGACAATAGATTTAGTAGGTAAAATTTTTAGTTCTAGAGTTATGGAAAAGGGCAGTGGCATCAATGTGTTGGAACTTTCTTATCCTGAGATGCTTCGTCAATCCGGGGTCTTTCCAGAGGGTTTTGATGTTGTTATTCCTTACGAACCCGTTAGGGCTGAATGGTATTGCCCTGGCTTTGTGTGCTTCTTTACCCATATATTTGAAATTGGGTTTGGCTTCCCTGTATCCTCTTTTATCAAGCGGTTCTTTGAGCTTTTTCCTCTAGCTCCAGCCCAATTGCTCCCCAGATTTTGGCGTTTGCTAGTTTGTGTTGATAAAATATGTAGAAGGCATGGGTTAGTCATGGATGTCGGGGACATTTTCTCGGTGTATCAGGTGAGGGGAATGGTGGTTATTGGTTTCAAGCACGAGTATAGGAAGGGATGGAACATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219070.p1 GENE.R_Transcript_219070~~R_Transcript_219070.p1 ORF type:complete len:163 (+),score=21.27 R_Transcript_219070:132-620(+)
MGKKSCAQKGPISRARNETIDLVGKIFSSRVMEKGSGINVLELSYPEMLRQSGVFPEGFDVVIPYEPVRAEWYCPGFVCFFTHIFEIGFGFPVSSFIKRFFELFPLAPAQLLPRFWRLLVCVDKICRRHGLVMDVGDIFSVYQVRGMVVIGFKHEYRKGWNI*

Click here to download the sequence:
Link to NCBI Protein BLAST