Transcript Information: R_Transcript_219084.p1


Annotated TAIR IDAT5G63830.1
Annotated Gene NameHIT-type Zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25543585-25544802 | Reverse length=405
E-Value2E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68879097942335
Replicate 20.66026101938044
Replicate 31.0084727243589
Condition 2: 8 Hour
Replicate 10.46199745183481
Replicate 20.70317238494294
Replicate 30.91328858467356
Condition 3: 24 Hour
Replicate 10.28877744940508
Replicate 20.27742464013305
Replicate 30.27531704008676


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219084.p1 GENE.R_Transcript_219084~~R_Transcript_219084.p1 ORF type:5prime_partial len:159 (+),score=20.89 R_Transcript_219084:1-477(+)
GAGCCATCCCCACTTCTCGCCATTCATGTGGTCGACATCTTATACAGCTATTGCTTTACCCTTCGTCTTTATAATGGGGATTGGCAATCAGATTCTGCTGGAGCTTCCATGGTGGTTCTCAGCGTGTCCTACATTTTGGGCCAAAGAGCACAGCCAGAATCCATGCTAGAAGCTGTAACATATTGCTTGGAGCAGACTTGTTCTCCATCGGGAGGTCTGGAGTTTGGACTTGGCGTTCTCGATGATGTAAAAATCCTACATTCCTTGGGAGGAGCTGCTCTGGTTTGCGCACTTTGTGACCCGCAAAGGTTGATTCAGGCAGTTTACAGAGAGCTTAAATCAGAGAAACCATTCTTTCAAAAAAATAAAAATAAAAAAAAATCAGAGAAACCAGGAAGCGCGAAGATGGCAGAAATCAGGGGCAAGCTCAAGCATGCAGAAAGAAAGATTTTACTTCATTATGTGTTGGGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219084.p1 GENE.R_Transcript_219084~~R_Transcript_219084.p1 ORF type:5prime_partial len:159 (+),score=20.89 R_Transcript_219084:1-477(+)
EPSPLLAIHVVDILYSYCFTLRLYNGDWQSDSAGASMVVLSVSYILGQRAQPESMLEAVTYCLEQTCSPSGGLEFGLGVLDDVKILHSLGGAALVCALCDPQRLIQAVYRELKSEKPFFQKNKNKKKSEKPGSAKMAEIRGKLKHAERKILLHYVLGA*

Click here to download the sequence:
Link to NCBI Protein BLAST