Transcript Information: R_Transcript_219119.p1


Annotated TAIR IDAT1G55520.1
Annotated Gene NameTATA binding protein 2
Annotated Gene Symbol(s)TBP2, ATTBP2
Annotation TypeOrtholog
Chromosome Positionchr1:20726150-20727483 | Reverse length=200
E-Value3.6E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6731880875159
Replicate 23.3244142325805
Replicate 30.95444739983968
Condition 2: 8 Hour
Replicate 12.6526353692849
Replicate 21.6770661380889
Replicate 32.4202147493849
Condition 3: 24 Hour
Replicate 12.2957807227704
Replicate 22.2055258890577
Replicate 31.6415778515173


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219119.p1 GENE.R_Transcript_219119~~R_Transcript_219119.p1 ORF type:3prime_partial len:120 (+),score=18.85,TBP|PF00352.17|1.8e-26 R_Transcript_219119:464-820(+)
ATGTTGGACAAGCAAGCAGTACCAGATAAAAACATGGCAGAACAATGTCTTGAAGGAAGATTGAATGTAGATTTATCGAAACATCCATCTGGTATCGTCCCTATGATTCAGAACGTTGTCTCAAGGGTAGACTTGGACTGCAAGTTGGATCTCAAGATCATTGCCGCGAAAGCTAAGAATGCAGAATTCAACAGCAAGCGTTTTAGTGGTGTAATTATGAGGATAAGGGAGCCAAGAACCACTGCTCTAATCTTCGCTAATGAAAAATTGGTTTGTACTGGAGCTAAGAGTGTCCATGCATCACAGCTAGCTGCTCGGAAATTTGCTCGAATAGTTCAGAAACTGGGATTTCCTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219119.p1 GENE.R_Transcript_219119~~R_Transcript_219119.p1 ORF type:3prime_partial len:120 (+),score=18.85,TBP|PF00352.17|1.8e-26 R_Transcript_219119:464-820(+)
MLDKQAVPDKNMAEQCLEGRLNVDLSKHPSGIVPMIQNVVSRVDLDCKLDLKIIAAKAKNAEFNSKRFSGVIMRIREPRTTALIFANEKLVCTGAKSVHASQLAARKFARIVQKLGFPA

Click here to download the sequence:
Link to NCBI Protein BLAST