Transcript Information: R_Transcript_219271.p1


Annotated TAIR IDAT5G51910.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21094704-21095585 | Reverse length=293
E-Value2.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7011767213731
Replicate 26.4522636040009
Replicate 36.2892554105305
Condition 2: 8 Hour
Replicate 13.4539255341202
Replicate 23.1541798063133
Replicate 34.297862464273
Condition 3: 24 Hour
Replicate 16.0141358984414
Replicate 25.1110423625519
Replicate 35.4030102249772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219271.p1 GENE.R_Transcript_219271~~R_Transcript_219271.p1 ORF type:complete len:397 (+),score=61.16,TCP|PF03634.9|1.7e+03,TCP|PF03634.9|2.8e-29,TCP|PF03634.9|6.2e+02 R_Transcript_219271:202-1392(+)
ATGGACCCTGTTCGACCGTACAACAACCACCCCCACCAACAACACCAAGAAGAAGAAATCAACGGTGGTGGTGAAGATGAAGAACACAACAACAACAATGAAAACAACAGCAGCAGCAACGACGACGAGAACGACAATGAGTACCCACCCGACCCGTTGCCTCCAGTGGACCCTATCGAGACCCGAAACCACACACCTACCCCTACGACGTCGTTACTACCATCAAGTTTAAAAATGGAGCCCGCCACCACCACAACAACAACAGACTCATTAATCCCACTAGGGGTGGTGGCTCCCGCCCGTAAACGGCCGTCAAAGGACCGACACACGAAGGTGGAGGGACGGGGAAGGAGGATCCGAATGCCCGCAGCCTGTGCGGCTCGGATCTTCCAACTGACCCGAGAACTTGGTCATAAGTCAGACGGTGAGACCATCAAGTGGCTTCTTGAAAGAGCAGAGCCTGCTATCATTGAAGCCACTGGTACCGGCACTGTACCGGCTATTGCCGTTTCTGTCAATGGGACCCTCAAGATTCCCACCACACCTGCCGGTCACCCTCATAACAACAATGATGACGATTCTGTTGGGGGAGCAAAGAGGAGGAGAACGAGCAACAGCGCATTTGTCGACGTGGCAGAGTTTAGTGGTCATGGTGGTTGTGGGAGTATTTCCAGTGGCCTTGCTCCTATTACTGCTGCCACGACGTCGTTTGGTGTTGGTAATAATAACAACAACATTAATGTCGGGGCCCAAGGAATTGTCCCCGTGTGGCCGGCGAATGCCTTCTTCATGTTGCCACCTAATCAACAGGCTCAGTTTTGGGCCATTCCTGCGGCTGCCGCGACTCCCGTATTCAATCTCACGGCCCGGCCCATTTCGAGTTATGGGGAAGTCCACGTGGCGGTGCCGGGGATTGGAAGCGGTGGTTGTGGTGGGAATGAGTCGAGTATGGCGCCGAGTTCTTCGAGTTCCGGATCAGGGACTAGTAATAGTAATAGCAATACAACAGCAGCAGCAGCACAACCAACAGCAACTCAATTGTTGAGGGATTTTCAATTGGAGATTTATGATAAAAGGGAGCTCCAATTAATGAGTGGGAGGCCTATCCATAATCATCACCAAGTTCAAGCACAATCACAAGGGCAACCTGCAACACCTCCACCCCCTTCTTCTTCATCACAAGCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219271.p1 GENE.R_Transcript_219271~~R_Transcript_219271.p1 ORF type:complete len:397 (+),score=61.16,TCP|PF03634.9|1.7e+03,TCP|PF03634.9|2.8e-29,TCP|PF03634.9|6.2e+02 R_Transcript_219271:202-1392(+)
MDPVRPYNNHPHQQHQEEEINGGGEDEEHNNNNENNSSSNDDENDNEYPPDPLPPVDPIETRNHTPTPTTSLLPSSLKMEPATTTTTTDSLIPLGVVAPARKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIKWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTTPAGHPHNNNDDDSVGGAKRRRTSNSAFVDVAEFSGHGGCGSISSGLAPITAATTSFGVGNNNNNINVGAQGIVPVWPANAFFMLPPNQQAQFWAIPAAAATPVFNLTARPISSYGEVHVAVPGIGSGGCGGNESSMAPSSSSSGSGTSNSNSNTTAAAAQPTATQLLRDFQLEIYDKRELQLMSGRPIHNHHQVQAQSQGQPATPPPPSSSSQAA*

Click here to download the sequence:
Link to NCBI Protein BLAST