Transcript Information: R_Transcript_21929.p1


Annotated TAIR IDAT5G26240.1
Annotated Gene Namechloride channel D
Annotated Gene Symbol(s)CLC-D, ATCLC-D
Annotation TypeOrtholog
Chromosome Positionchr5:9189622-9194347 | Forward length=792
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.6128674133
Replicate 29.2252323863004
Replicate 310.63207116588
Condition 2: 8 Hour
Replicate 111.173471618691
Replicate 213.439852058392
Replicate 316.99199012443
Condition 3: 24 Hour
Replicate 114.307473083237
Replicate 210.610678657918
Replicate 311.757150366365


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21929.p1 GENE.R_Transcript_21929~~R_Transcript_21929.p1 ORF type:complete len:767 (+),score=117.53,Voltage_CLC|PF00654.16|4.4e+02,Voltage_CLC|PF00654.16|1.7e-93,CBS|PF00571.24|0.033,CBS|PF00571.24|8.7e-07 R_Transcript_21929:1349-3649(+)
ATGTTCTCGAATCATTTTCAGAACGGAATGGAAACGGCGAGACTGGTATGGTCTCGGATACCGAATTCAGAAGACGATGATTTGGATGGGGTTGGCATTTCCAAAAAGACCGATTCTGGTGGTGCTGAGAGTCTTGATTACGAGGTTATTGAGAATTATGCTTATCGAGAAGAACAGGAAAAGAGAGGGATGCTGTTCGTTAGTTATCAAGTAGCCTTGAAATGGTTCCTCGCGTTGCTTATCGGAATAGGCACAGGGCTTGCTGCTGTTTTTATAAATATCTCTGTGGAAAATTTTGCGGGGTGGAAATTTGCATTGACGTTCACAATAATTCAGAAGTCTTATTTTGCTGGACTATTAATTTATGTATTAATCAACTTGGCCCTGGTATATTCTTCTGTATATATAGTTACCCACTTTGCACCAGCTGCAGCAGGATCTGGTATACCAGAAATAAAGGGGTATTTGAATGGGATTGATGTTCATGGCATCCTTTTGTTTAGAACTTTAGTAGGAAAGGTGTTTGGAAGCATTGGCTCAGTGGGAGGTGGATTAGCTCTTGGAAAAGAAGGCCCTCTTGTTCACACCGGTGCTTGTATCGCTTCCCTTCTTGGACAAGGTGGATCAACAAAGTATCATTTGAGGTCAAGATGGCTTCAAGGTTTCAATAGTGATCGGGATCGGCGTGACCTAGTGACATGTGGCTGTGCAGCTGGAGTTGCAGCAGCTTTTAGAGCTCCAGTTGGTGGTGTATTATTTGCGCTGGAGGAGGTTACATCATGGTGGAGGAGTCAACTTATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTCGCTGTTGTTGTGCGTACTGCCATGGCATGGTGTAAAAGTGGAAAATGTGGACATTTTGGTGCTGGTGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGATTACTCATTTGCGGAGATGTTGCCAATGGCTGTTATTGGGGTAATAGGTGGTCTTCTTGGGGCTTTGTTTAATCAACTAACATATTATATTGCTTATTGGCGTCGAAACTATTTACACAAGAGGGGGACTCGAGTTAAAATCATTGAAGTCTGCCTTATTTCTGTGATAACCTCAGCAATCTCTTTTGGATTGCCGCTCTTAAGGAAGTGCAGTCCTTGCCCTGCATCTGAAGTTGAATGTCCCAATCCCCCAGGAGTGTATGGGAATTATGTAAATTTCTACTGTCGCAATGATAAGGAATACAATGACCTTGCAACCATTTTCTTCAATACTCAGGATGATGCTATCAGGAATCTGTTTAGCGCCAAAACATTTCACGAGTATAGTGCTCAAAGTTTGTTAGCCTTCTTGGTTATGTTCTACACATTAGCCGTAGTGACATTTGGCACAGCTGTTCCGGCTGGTCAATTTGTGCCTGGAATAATGATAGGATCAACTTATGGTCGTCTTGTTGGCATGTTTGTTGTCAGCTTCTACAAGAAGCCCAATATAGAAGAGGGAACGTATGCACTTCTGGGCGCTGCTTCCTTTTTAGGAGGCTCAATGCGAATGACGGTCTCTCTCTGTGTCATAATGGTTGAGATCTCTAATAACTTGAGGTTTCTACCTCTTATTATGCTTGTTCTTCTTATATCTAAGGCTGTTGGGGATGCTTTTAACGACGGTTTATACGAAGAACAGGCTCAATTGAGGAACATTCCATTGCTGGATTCAAGAGCAAAAAATGAGATGAGAAGGATGACTGCAAAAGAAGCTAGTGGTAGTCGAAAGGTTGTCAGTCTACCTCGTGTCATCAAGGTTGCGGATGTGGTGTCTATTCTGAGAACCAACAAGCACAATGGCTTTCCTGTGATAGATCACACAAGGAGTGGAGAAACACTTGTCATTGGGCTGATGCTCCGCAGTCATTTATTGGTGCTGCTTCAGTCCAAGGTGGATTTCCAACACAGTCCTTTGCCCAGTGATTCAAGAGGTGGATCCTTCCCAATAAGGCATAATAATAGTGAATTCATCAAACCAGTTTCCAGTAAAGGGCTTACTCTGGATGATATTCATCTGAGTCAGGATGACTTGGAGATGTACATAGATCTTGCTCCGTTTTTGAACCCCTCACCTTATATTGTCCCTGAAGATATGTCACTGTCAAAGGTCTACAATCTGTTCCGTCAACTAGGATTAAGGCATTTACTGGTCGTTCCTCGACCTTCTCGTGTTGTAGGATTAATCACCCGTAAGGATTTGCTAATTGAGGGTGGTGAGGATTCAGAGACGGAACTCCAATCCACTAGTAGCTCAACGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21929.p1 GENE.R_Transcript_21929~~R_Transcript_21929.p1 ORF type:complete len:767 (+),score=117.53,Voltage_CLC|PF00654.16|4.4e+02,Voltage_CLC|PF00654.16|1.7e-93,CBS|PF00571.24|0.033,CBS|PF00571.24|8.7e-07 R_Transcript_21929:1349-3649(+)
MFSNHFQNGMETARLVWSRIPNSEDDDLDGVGISKKTDSGGAESLDYEVIENYAYREEQEKRGMLFVSYQVALKWFLALLIGIGTGLAAVFINISVENFAGWKFALTFTIIQKSYFAGLLIYVLINLALVYSSVYIVTHFAPAAAGSGIPEIKGYLNGIDVHGILLFRTLVGKVFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRSRWLQGFNSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMAWCKSGKCGHFGAGGFIIWDISDGQEDYSFAEMLPMAVIGVIGGLLGALFNQLTYYIAYWRRNYLHKRGTRVKIIEVCLISVITSAISFGLPLLRKCSPCPASEVECPNPPGVYGNYVNFYCRNDKEYNDLATIFFNTQDDAIRNLFSAKTFHEYSAQSLLAFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVSFYKKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEISNNLRFLPLIMLVLLISKAVGDAFNDGLYEEQAQLRNIPLLDSRAKNEMRRMTAKEASGSRKVVSLPRVIKVADVVSILRTNKHNGFPVIDHTRSGETLVIGLMLRSHLLVLLQSKVDFQHSPLPSDSRGGSFPIRHNNSEFIKPVSSKGLTLDDIHLSQDDLEMYIDLAPFLNPSPYIVPEDMSLSKVYNLFRQLGLRHLLVVPRPSRVVGLITRKDLLIEGGEDSETELQSTSSSTL*

Click here to download the sequence:
Link to NCBI Protein BLAST