Transcript Information: R_Transcript_219410.p1


Annotated TAIR IDAT5G40450.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16184799-16195513 | Reverse length=2889
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7584772323046
Replicate 24.8257625956814
Replicate 35.4495867668266
Condition 2: 8 Hour
Replicate 14.0480663824075
Replicate 22.3442859994791
Replicate 36.294510134489
Condition 3: 24 Hour
Replicate 112.774908860577
Replicate 29.6047095168643
Replicate 315.356696030323


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219410.p1 GENE.R_Transcript_219410~~R_Transcript_219410.p1 ORF type:internal len:248 (-),score=80.11 R_Transcript_219410:3-743(-)
GGAAAGAATAATGACACTGAGACTGAAGTGTGTGACTTTAGTAAGGAACCAGTAGCAGCTGCAGACAATTTTGTCGGCCGAAATACTGATGACGAAGTGAAGCCAAAAGAAGATCAGTTTCCAGCTGATATTTTGGGACAAAAGGAAAGCAACTTATTAGAGAGTGAAGATACAATTGACAGTGATTCCTTGGAAATTAAGGTTGATGGTCAAGAAGTTAACATCGAAATTTCCGAGGAAGGTGATACCACTGTGGTAGTAGAATCAGAGTCAAATGTTGATGAAGGATTGCTGCAAGAAGCACCAGTAGAGAACGACAAAAGTGTAGAGGTTTTTGAAGTTACAGGGACTGAAGATTCAAACGTTGCTGAACACTTCAATGACAGTCCTAAGCCAGTGGCTAATTGTGCCACTGAAGATGAGGACCTGAAATTTGATTCTGTTTCAGTTACGGAATTCTCAAATGATGCTCAAGAATCTGAATCAAGTAGTTTGGAAATTGTCAATGTGGACAAAGAGCTTGAAAACTGTCAGCAAGAGCTTGAGAATCCTGCACATGACTATCCAGTTGAGAAGGTTGAGGGTATCCATGCAGAAGATCAGATGGCCAATGCAGTTGATTCTGAGTCAACTACTCAAACTGATCAACTTGCACCTATTGTAGAGGGAACCCCTCTGTGTCATAAGAGCCTCCGAACACTGAAGAAGATGCTGAAAAAGAGACTTCAGGATACAACGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219410.p1 GENE.R_Transcript_219410~~R_Transcript_219410.p1 ORF type:internal len:248 (-),score=80.11 R_Transcript_219410:3-743(-)
GKNNDTETEVCDFSKEPVAAADNFVGRNTDDEVKPKEDQFPADILGQKESNLLESEDTIDSDSLEIKVDGQEVNIEISEEGDTTVVVESESNVDEGLLQEAPVENDKSVEVFEVTGTEDSNVAEHFNDSPKPVANCATEDEDLKFDSVSVTEFSNDAQESESSSLEIVNVDKELENCQQELENPAHDYPVEKVEGIHAEDQMANAVDSESTTQTDQLAPIVEGTPLCHKSLRTLKKMLKKRLQDTTL

Click here to download the sequence:
Link to NCBI Protein BLAST