Transcript Information: R_Transcript_219977.p1


Annotated TAIR IDAT5G11010.2
Annotated Gene NamePre-mRNA cleavage complex II protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3484176-3486067 | Forward length=368
E-Value2.3E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8503848619404
Replicate 25.5413964779092
Replicate 37.2103532384984
Condition 2: 8 Hour
Replicate 16.3437955190199
Replicate 27.6341025172086
Replicate 38.3506198979989
Condition 3: 24 Hour
Replicate 19.6722965075557
Replicate 210.413499960442
Replicate 39.5924323204078


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219977.p1 GENE.R_Transcript_219977~~R_Transcript_219977.p1 ORF type:complete len:413 (+),score=62.06,CLP1_P|PF16575.1|1.1e-39 R_Transcript_219977:110-1240(+)
ATGGAAGCTGTAGGAGAAACCCAATCACCCAACATACTCATACCAGAAGAATGGTCTGTTGCTGCTGAATCCATTGCCTATGATTCCTCCACTTCTATTCCTCCTATTGCTTTGATTTGTGGAGCTAAGAACAGTGGCAAAACCACCTTCTCTCGTTACCTCCTCAACATTCTCCTTCTCAGGTACAAAAGAATCGCTTATTTGGACACAGATGTGGGACAGCCAGAGTTCACTCCCCCTGGTTGTTTATCACTTACTGTAATCGATAAGGCAACTCCAGACCTGACGATCCCTATCCTGAAAACACCTGAAAGATGCTACTTCTTTGGTGACATTTCTTCAAAAAGGGATCCTGAAACATACTTGAAGTGTATAATTGCATTATTTGAATACTACAAACAGAAGATATGCTTTCCACGTAAGAACCGAAGTCTAGGCAGGGCTGAGCTACCTCTCATCATTAACACACCTGGCTGGGTCAAAGGTATGGGTTATGATACATCGGTTGTTATGTTGAAAACTATTGGTCCAACTCACATTATCAAGATAAACATATCTTCTGAGAGTAAAAATCTACCTGCTGGAGCGTTCTGGTTGGACAATGACAATGATGCTTCGGTCAACTTGATTGAGATCAGCTCTGCACGCAAGGATTCTAACAACAGATCGGTGTTGGTGCAAAAGGAAGCACGTCTTAATCGAGAGTTAAGGCTGAGGGGTTACTTTAGGCAATGCTTCCCAAGTGATATGAATATCGTGACAATTAAGGAACTTGGACTTGCATTAGCATCACATCCTCCTTATCAAGTCCCTATACAAAGGATCAAAATTAGTCATCTTCATTGCCAGGTCCCCAGCACTGAACTACTCTATAGTTTGAATGGGACCATAGTTGGCTTGGCCGTTAGCTCTGAGGACAGTCAATCTCTGCCTGTCTGTGTTGGCCTTGGCATTGTTAGAGGCATCGATATGTTGAAGAATTTGCTGTACGTGATCACACCTGTTACACAAAGTATCCTAGCTAGGGTAGATCTTCTCCTACAAGGATTTATCCAGATTCCTACTGATTTGCTGCAGGTTCATGGATGCATATCACCTTACATGTCTGCTAATGTGATCCCTTCAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219977.p1 GENE.R_Transcript_219977~~R_Transcript_219977.p1 ORF type:complete len:413 (+),score=62.06,CLP1_P|PF16575.1|1.1e-39 R_Transcript_219977:110-1240(+)
MEAVGETQSPNILIPEEWSVAAESIAYDSSTSIPPIALICGAKNSGKTTFSRYLLNILLLRYKRIAYLDTDVGQPEFTPPGCLSLTVIDKATPDLTIPILKTPERCYFFGDISSKRDPETYLKCIIALFEYYKQKICFPRKNRSLGRAELPLIINTPGWVKGMGYDTSVVMLKTIGPTHIIKINISSESKNLPAGAFWLDNDNDASVNLIEISSARKDSNNRSVLVQKEARLNRELRLRGYFRQCFPSDMNIVTIKELGLALASHPPYQVPIQRIKISHLHCQVPSTELLYSLNGTIVGLAVSSEDSQSLPVCVGLGIVRGIDMLKNLLYVITPVTQSILARVDLLLQGFIQIPTDLLQVHGCISPYMSANVIPSN*

Click here to download the sequence:
Link to NCBI Protein BLAST