Transcript Information: R_Transcript_219980.p1


Annotated TAIR IDAT5G11010.2
Annotated Gene NamePre-mRNA cleavage complex II protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3484176-3486067 | Forward length=368
E-Value2E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.421570167813
Replicate 20.91572649790708
Replicate 30.71360553259042
Condition 2: 8 Hour
Replicate 11.5255990621337
Replicate 21.3932013608215
Replicate 31.9226005018478
Condition 3: 24 Hour
Replicate 11.7164715684265
Replicate 21.305451460813
Replicate 32.3183238609175


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_219980.p1 GENE.R_Transcript_219980~~R_Transcript_219980.p1 ORF type:internal len:321 (+),score=52.28,CLP1_P|PF16575.1|2e-41 R_Transcript_219980:1-960(+)
GTCACAGAAAAAAACACTGGGGCGGCAGATATACTCCTTTTCTCTCACCACCAAACTCGCAGGACAAACACGAAACTCACGACAAAGACAGAGAACAGAGAGATGGAAGCTGTAGAAGCTGTAGGAGAAACCCAATCACCCAACATACTCATACCAGAAGAATGGTCTGTTGCTGCTGAATCCATTGCCTATGATTCCTCCACTTCTATTCCTCCTATTGCTTTGATTTGTGGAGCTAAGAACAGTGGCAAAACCACCTTCTCTCGTTACCTCCTCAACATTCTCCTTCTCAGGTACAAAAGAATCGCTTATTTGGACACAGATGTGGGACAGCCAGAGTTCACTCCCCCTGGTTGTTTATCCCTTACTGTAATTGAGAAGGCAACTCCAGACCTGACTATCCCTATCCTGAAAACACCTGAAAGATGCTACTTCTTTGGTGACATTTCTTCAAAAAGGGATCCTGAAACATACTTGAAGTGTATAATTGCATTATTTGAATACTACAAACAGAAGACATGCTTGCCGCGTAAGAACCGAAGTCCAGGCAGGGCTGAGCTACCTCTCATCATTAACACACCTGGCTGGGTCAAAGGTATGGGTTATGATACATTGGTTGTTATGTTGAAAACAATTGGTCCAACTCACGTTATCAAGATAAACATATCTTCTGAGAGTAAAAATCTACCTGCTGGAGCGTTCTGGTTGGACAATGACAATGATGCTTCGGTCAACTTGATTGAGATCAGCTCTGCACGCAAGGATTCTAACAACAGATCGGTGTTGGTGCAAAAGGAAGCACGTCTTAATCGAGAGTTAAGGCTGAGGGGTTACTTTAGGCAATGCTTCCCAAGTGATATGAATATCGTGACAATTAAGGAACTTGGACTTGCATTAGCATCACATCCTCCTTATCAAGTCCCTATACAAAGGATCAAAATTAGTCATCTTCATTGCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_219980.p1 GENE.R_Transcript_219980~~R_Transcript_219980.p1 ORF type:internal len:321 (+),score=52.28,CLP1_P|PF16575.1|2e-41 R_Transcript_219980:1-960(+)
VTEKNTGAADILLFSHHQTRRTNTKLTTKTENREMEAVEAVGETQSPNILIPEEWSVAAESIAYDSSTSIPPIALICGAKNSGKTTFSRYLLNILLLRYKRIAYLDTDVGQPEFTPPGCLSLTVIEKATPDLTIPILKTPERCYFFGDISSKRDPETYLKCIIALFEYYKQKTCLPRKNRSPGRAELPLIINTPGWVKGMGYDTLVVMLKTIGPTHVIKINISSESKNLPAGAFWLDNDNDASVNLIEISSARKDSNNRSVLVQKEARLNRELRLRGYFRQCFPSDMNIVTIKELGLALASHPPYQVPIQRIKISHLHCQ

Click here to download the sequence:
Link to NCBI Protein BLAST