Transcript Information: R_Transcript_220172.p1


Annotated TAIR IDAT4G14746.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8462720-8464326 | Reverse length=212
E-Value8E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.29180557447328
Condition 2: 8 Hour
Replicate 10
Replicate 20.42727799696533
Replicate 30.34684606280994
Condition 3: 24 Hour
Replicate 10.43868421454212
Replicate 20.28095871198188
Replicate 30.41823639529103


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220172.p1 GENE.R_Transcript_220172~~R_Transcript_220172.p1 ORF type:5prime_partial len:157 (+),score=7.79 R_Transcript_220172:1-471(+)
TTCAAGCAGAGAACAGCCACAACGTTCATCCTTTCCCCCAAAATTGAGAACCCTAACCCTAACCACTCAAGCAATCACATCTCCTCTCATCCTCTCACCGGAGACTCGCCGGATTCTCGCCGGAGAATCGCCGACAAAGGTACCCTTGATCAGTCCTGCTCAGAAGTGGCTGCTCCAGCTCCTTCACAGGGACCTCCATCAAATTCGTCAATATTTGAACTTTGCTACTGGGCTAATTGTGGGGGAGGTGTATGCAACAAAACATCAGCATTCACATATTCATGTGAGTGTAGGGATGGATACTACAATCTCCTCAATAATACCGCTTTCCCCTGTTTTAAAGAATGTAAGCCAAAGAAACTCTACATCATGTCACTAATTTTAAACGGTAACGGCTATAGTAGTCTCCAATTAATTATCAACTGCCAGTGCCGACCAACATATATATATCAAAAGGATACTAATTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220172.p1 GENE.R_Transcript_220172~~R_Transcript_220172.p1 ORF type:5prime_partial len:157 (+),score=7.79 R_Transcript_220172:1-471(+)
FKQRTATTFILSPKIENPNPNHSSNHISSHPLTGDSPDSRRRIADKGTLDQSCSEVAAPAPSQGPPSNSSIFELCYWANCGGGVCNKTSAFTYSCECRDGYYNLLNNTAFPCFKECKPKKLYIMSLILNGNGYSSLQLIINCQCRPTYIYQKDTNS*

Click here to download the sequence:
Link to NCBI Protein BLAST