Transcript Information: R_Transcript_220504.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.57480100738
Replicate 237.397184137708
Replicate 331.118586923075
Condition 2: 8 Hour
Replicate 129.105839465593
Replicate 233.161609673909
Replicate 332.261919253593
Condition 3: 24 Hour
Replicate 129.282033369675
Replicate 240.864649491598
Replicate 338.737107540207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220504.p1 GENE.R_Transcript_220504~~R_Transcript_220504.p1 ORF type:internal len:265 (-),score=41.03,gag_pre-integrs|PF13976.2|1e-16,zf-CCHC|PF00098.19|1.3e-07,zf-CCHC|PF00098.19|4.6e+03 R_Transcript_220504:2-793(-)
ATTGCTAAACAGCAAAAGGGAGGAGAGAATGTAGCACATGTGAAGTGTTACAATTGCAGAAACAAAGGTCACTTTGCTCGTGATTGTCCCGAGCCAAAGAAGGTACCTAGTTTCACTTCTTCACATGAATTATTTGTTTGTTCTCATGCATTAGTTGCTAACTCCATTCCTAATTGGATTGTAGATTCGGGAGCAAGCAAGCACATAGTTCATGACCGAGCTGGTTTTGTGGACTATCATCGCTTTCCGGTGGGTTCACAAACTGTCGTACTAGGAAATGGCAATGAGGAAGACGTCCTCGGAATTGGGACTTACCAGCTCAAGCTTCGTGGAGGAAATAAATTGTTACTTCATGATACTCTCTACGCACCTGGGGTGCGATGTTGTTTACTTTCTGTTGTTTCTTTGTTGAAACTTGGATTTTCTTTTAATTTTCAATCGGATAGTTTAGACATTTTGTACCATGGAAATTTGTTTGGCCGTGGTATTTTGAAAAATGGTTTCTTTGTGCTTGATTTGGAAGATATTTATGATAATTCCTCTTATGCCTTCGCTACTCACTTTGATAATGAATCTGAATCTGTTTTATGGCATGCTAGACTTGGTCATATTGGCCAAGATAGGATGAATAGGCTGGCTAAAGAAGGTCTTTTAGATTGTGTCACTAAGGTTAAGTTGCCTAAGTGCGAGCCATGCTTAGCTGGCAAGGCTAGCAAAAAGCCTTTTGGTAGGGCTTCAAGGGCATCAAGTCCCTTAGAGTTAATTCATTCTGATATTTGTGGGCCTTTAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220504.p1 GENE.R_Transcript_220504~~R_Transcript_220504.p1 ORF type:internal len:265 (-),score=41.03,gag_pre-integrs|PF13976.2|1e-16,zf-CCHC|PF00098.19|1.3e-07,zf-CCHC|PF00098.19|4.6e+03 R_Transcript_220504:2-793(-)
IAKQQKGGENVAHVKCYNCRNKGHFARDCPEPKKVPSFTSSHELFVCSHALVANSIPNWIVDSGASKHIVHDRAGFVDYHRFPVGSQTVVLGNGNEEDVLGIGTYQLKLRGGNKLLLHDTLYAPGVRCCLLSVVSLLKLGFSFNFQSDSLDILYHGNLFGRGILKNGFFVLDLEDIYDNSSYAFATHFDNESESVLWHARLGHIGQDRMNRLAKEGLLDCVTKVKLPKCEPCLAGKASKKPFGRASRASSPLELIHSDICGPLN

Click here to download the sequence:
Link to NCBI Protein BLAST