Transcript Information: R_Transcript_220531.p1


Annotated TAIR IDAT5G16000.1
Annotated Gene NameNSP-interacting kinase 1
Annotated Gene Symbol(s)NIK1
Annotation TypeOrtholog
Chromosome Positionchr5:5224264-5227003 | Forward length=638
E-Value2.2E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6505921909438
Replicate 20.73487051457043
Replicate 32.0616063836537
Condition 2: 8 Hour
Replicate 11.9588691957796
Replicate 22.3478925933245
Replicate 34.7194187613006
Condition 3: 24 Hour
Replicate 12.0662026504934
Replicate 21.4335918278875
Replicate 34.049225367076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220531.p1 GENE.R_Transcript_220531~~R_Transcript_220531.p1 ORF type:3prime_partial len:200 (-),score=16.58,Pkinase|PF00069.21|1.2e-17,Pkinase_Tyr|PF07714.13|9.3e-17 R_Transcript_220531:1-597(-)
ATGCTCAAAGTCTTAAACAAATGTAGTTTCAACTTTCGGTTCAATTCAGTATCAATTCAGTTTAGTTCAGTTTCAGTTCTTTTACATATACATTTGGATATAGGCAAAATCCTGTCTTATTTACTAGTAGTATGCATTCGAATGATTTCAGATCGACATCATGAAGAAGTTTGCCTAGGAAACTTGAGGAGGTTCCAGTTCCGGGAACTTCAGAGTGCCACAGGCAACTTTAGCAGCAAAAACATACTTGGAAAAGGCGGCTTTGGGATAGTATACAAAGGCACACTACCAGATGGGACTATTGTGGCTGTAAAACGGCTCAAGGATGGGAACGCCATTGGTGGGGAAATTCAATTTCAAACTGAAGTTGAGTTGATCAGCTTAGCAGTGCACAGGAACCTTCTACGCCTCAATGGCTTTTGTATGACAGCAACAGAACGTCTTTTAGTTTACCCTTACATGTCTAATGGAAGTGTTGCTTCTCGTCTTAAAGCAAAGCCAGCTTTAGACTGGGTTACCAGAAAGAGAATTGCATTAGGCGCAGCAAGGGGTCTGTTGTACCTTCATGAGCAATGTGACCCGAAGATAATACATAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220531.p1 GENE.R_Transcript_220531~~R_Transcript_220531.p1 ORF type:3prime_partial len:200 (-),score=16.58,Pkinase|PF00069.21|1.2e-17,Pkinase_Tyr|PF07714.13|9.3e-17 R_Transcript_220531:1-597(-)
MLKVLNKCSFNFRFNSVSIQFSSVSVLLHIHLDIGKILSYLLVVCIRMISDRHHEEVCLGNLRRFQFRELQSATGNFSSKNILGKGGFGIVYKGTLPDGTIVAVKRLKDGNAIGGEIQFQTEVELISLAVHRNLLRLNGFCMTATERLLVYPYMSNGSVASRLKAKPALDWVTRKRIALGAARGLLYLHEQCDPKIIHR

Click here to download the sequence:
Link to NCBI Protein BLAST