Transcript Information: R_Transcript_220540.p1


Annotated TAIR IDAT5G15410.1
Annotated Gene NameCyclic nucleotide-regulated ion channel family protein
Annotated Gene Symbol(s)DND1, ATCNGC2, CNGC2
Annotation TypeOrtholog
Chromosome Positionchr5:5003460-5006763 | Reverse length=726
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73011843818875
Replicate 20.45810109999196
Replicate 30.52754910827503
Condition 2: 8 Hour
Replicate 10.83103541639135
Replicate 20.48787378562587
Replicate 30.83607418615116
Condition 3: 24 Hour
Replicate 10.19479351587143
Replicate 20.56140658994197
Replicate 30.68979432952646


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220540.p1 GENE.R_Transcript_220540~~R_Transcript_220540.p1 ORF type:5prime_partial len:825 (+),score=67.23,Ion_trans|PF00520.27|2.1e+03,Ion_trans|PF00520.27|3.6e-10 R_Transcript_220540:2-2476(+)
AAGGGAACACTTGGCCTGAACTGCCCAAAATCCACAACAGAACAGGTCCCCCTAGTAAAGTTCCGTAAACAGGATCCTTCCTTCTTCAATTTCATTTTCATGTGCTCACTCAACTTAATCTCTCACTACTCGACAGACCAAGAAGCTGTTCTCATCCCTTCAATTCCCCTTCTTCTTCACTACACCACTTACCCATCTATCCCTTCTAATCAAACAAAGTGTCCCTTAATTTTTTTTCTCCTCTTCAACAATTTTTTCCATGGTTGCCCCTTCCCTACCACCATGCCCTCTCTTCATTTCCCCAATTTTTTTCTCATCAGGTTTGTGCAGAAGCTGCTCAAATGCGGAAGTGACGAGAAAACGAACGGGGCTGTAGACGTGAGTAGCAGCCACGGGCTAAGTGGCGGCAGTACTGGTGGTGTTGGCGGCAACAACAGTAATATCGAGGAATATGAGAGTAGCAGTACCCCAATTGAGTGTTACGCCTGCACCCAAGTCGGTGTGCCGGTGTTCCACTCAACCAGCTGCGATCGGGCTAACCAGCCCGAGTGGGAGGCCTGTGCCGGATCCTCCCTCTATCCAACCAATGCCCGCCCTTCCACCTCTCGGGCTAGAGGGAGGAGTCGACACAGTAGCAGCAGTAGAAGGCAGTCAAACCTTTTCGGACCCATCCTCGACCCAAGGAGCGACAGGGTCCGAAACTGGAACCGGATCACACTGCTTGCCAGGGCAATCGCCCTGGCACTTGATCCAGTTTTCTTTTACGGTTTGTCTCTCGGCAGGAGCGGGTCGTGTCTTTACTTGGATGGGGTGTTGGTTGCTGTTGTCACGGTCCTTCGCACGTGTGTGGATGCGGTTCACCTCTGGCACGTGTGGCTCCAGTTCCGGCTTGCTTACGTGTCAAGAGAATCGTTGGTTGTTGGTTGTGGGAAGCTCGTGTGGGATGCACGTGCAATTGCTTCTCACTATGTTCGCTCCTTGAAGGGCTTCTTGTTCGATCTTTACGTTATACTGCCTATCCCTCAGGTCATATTCTGGTCTTTGGTACCACAATTACTGAGAGAAGATCAAATAGGAATCCTGATGACAATAATCCTTCTTATCTTTCTGGTCCAATTCTTGCCCAAAGTTTACCACAGTATATATGTAATGAGAAAAATGCAAAAGGTTACTGGGTATATATTTGGTACCATATGGTGGGGGTTTGGATTGAATCTCATTGCTTACTTTATAGCTTCTCATGTTGTTGGAGGATGTTGGTACGTTCTTGCAATACAACGGGTTGCAGCTTGCCTTGCACAGCAGTGCAATCGAAACAGCAAGTGTCATCTATCATTGTCTTGCTCAAAAGAAGTTTGCTACCAGTTTTTACAACAAGAAGACGGACTTGGGACTTGTGATAATAACTCCACAATGTTCCCAAAGTCGTTTTGCTTAGATGACAATGGGCCTTTCAGCTATGGAATTTATAGTCAAGTTCTTCCTGTCCTGTCCAGCAATGCCATCGTTATTAAGATCCTTTATCCTATATCATGGGGTTTGTTCCAGCTTAGCACCTTCGGAAATAATCTGACTCCCACAAGCCAATGGGCAGAAGTGGTATTTTGCATGAGCCTTGTACTTGGTGGTTTAATGCTCTTTACCTTGTTGATAGGCAACATTCAGGTATTTCTGCATAATGTGATGGCGAAAAAGAGAAAGATGCAGCTTAGATGCCGAGACATGGAATGGTGGATGAGACGGAGACAATTACCATCTCGGCTTAGGCAAAGAGTCCGTCACTTTGAACGCCAGAATTGGGTCACTACAGGTGGAGTTGATGAGATGGAGTTGATCAAAGACTTGCCAGAAGGGCTTCGCCGAGACATTAAGCGCCATCTTTGCCTTCAGCTCATCAAGAAGGTTCCCCTGTTCCATTGCTTGGACGATCTCATCCTTGACAACATTTGCGACAGAGTTAGACCACTCATCTACTGCAAGGACGAGAAGATCATGAGGGAAGGAGATCCTGTGCAACGGATGGTGTTCATAGTTCGAGGGCGAATAAAAAGCAACCAAAACTTAAGCAAAGGAATGGTAGCTACAGATGTTCTTAAACTAGGATCCTTTCTAGGAGACGTGCTCTTGTCTTGGTGCCTTCGAAGACCGTTCATTCACCGGCTCCCAGCCTCATCAGCAACATTCTTATGTCTAGAATCAACTGAGGCTTTTGGTCTAGATGCATATGACCTTCGTTACATTACTGAACATTTTCGTTATAAATTTGCAAATGATCATCTTAGGCGGACTTTGAGGTACCATTCCTCTAACTGGAGGACGTGGGCAGCAGTTAATATACAGTTTGCTTGGCGGCGTTACATGAAGAGAACCAGAGGTTCAGTGCCTCATGTGACCCAGAATGGTGATGCTGACAAAAGGCTCCTCCAGTTTGCTGCTTTGTTCATGTCCATCAGACCACATGATCATCTTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220540.p1 GENE.R_Transcript_220540~~R_Transcript_220540.p1 ORF type:5prime_partial len:825 (+),score=67.23,Ion_trans|PF00520.27|2.1e+03,Ion_trans|PF00520.27|3.6e-10 R_Transcript_220540:2-2476(+)
KGTLGLNCPKSTTEQVPLVKFRKQDPSFFNFIFMCSLNLISHYSTDQEAVLIPSIPLLLHYTTYPSIPSNQTKCPLIFFLLFNNFFHGCPFPTTMPSLHFPNFFLIRFVQKLLKCGSDEKTNGAVDVSSSHGLSGGSTGGVGGNNSNIEEYESSSTPIECYACTQVGVPVFHSTSCDRANQPEWEACAGSSLYPTNARPSTSRARGRSRHSSSSRRQSNLFGPILDPRSDRVRNWNRITLLARAIALALDPVFFYGLSLGRSGSCLYLDGVLVAVVTVLRTCVDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFLFDLYVILPIPQVIFWSLVPQLLREDQIGILMTIILLIFLVQFLPKVYHSIYVMRKMQKVTGYIFGTIWWGFGLNLIAYFIASHVVGGCWYVLAIQRVAACLAQQCNRNSKCHLSLSCSKEVCYQFLQQEDGLGTCDNNSTMFPKSFCLDDNGPFSYGIYSQVLPVLSSNAIVIKILYPISWGLFQLSTFGNNLTPTSQWAEVVFCMSLVLGGLMLFTLLIGNIQVFLHNVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQNWVTTGGVDEMELIKDLPEGLRRDIKRHLCLQLIKKVPLFHCLDDLILDNICDRVRPLIYCKDEKIMREGDPVQRMVFIVRGRIKSNQNLSKGMVATDVLKLGSFLGDVLLSWCLRRPFIHRLPASSATFLCLESTEAFGLDAYDLRYITEHFRYKFANDHLRRTLRYHSSNWRTWAAVNIQFAWRRYMKRTRGSVPHVTQNGDADKRLLQFAALFMSIRPHDHLD*

Click here to download the sequence:
Link to NCBI Protein BLAST