Transcript Information: R_Transcript_220562.p1


Annotated TAIR IDAT2G38330.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16064571-16067318 | Forward length=521
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63305066894978
Replicate 20.1213658983601
Replicate 30.13240888783903
Condition 2: 8 Hour
Replicate 10.14153679160257
Replicate 20.38776095678356
Replicate 30.31476781422636
Condition 3: 24 Hour
Replicate 10.13270408802141
Replicate 20.38246113683082
Replicate 30.50607409680687


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220562.p1 GENE.R_Transcript_220562~~R_Transcript_220562.p1 ORF type:5prime_partial len:173 (+),score=14.71 R_Transcript_220562:3-521(+)
GTAAACGTTTCTTTGACTATTTTTCATTTTTTTCATCTTGAAGGCTCGGTTGAATTAGCAGCCGTTGGGGTGTCAGTATCAGTGTTTAACTTAGTATCAAAATTGTTTAATGTCCCATTGCTCAACATCACAACATCCTTTGTTGCTGAGGAGGATGCTTTAATTAGTATGCAAAAGGAGAGCTCTATTCAAGGTGGCGAAGGTATACAAACAACAGTTCTTATTGTGATGCCCCTATGCCTGTCTAAGCCAATTAGTTGGGTTTACATTTGGTATTGTTGTGTTACAGACAAGCACGAAAACAAGAAAGCCCTTCCTTCGGTTTCTACATCTTTAATTCTGGCAGCTGGTCTTGGATTGGCAGAAGCTGTGGCGCTGTCAGTTGGATCTGGATTTCTAATGAATATTATGGGTATATCTGTTGTATGTCTATCTTGGCTATTCATGTATTTATGCTTATCTGAGTTTAATATTACTTCAAGTAGTAGTTGCTGTATATTTTGGCTACTTGGTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220562.p1 GENE.R_Transcript_220562~~R_Transcript_220562.p1 ORF type:5prime_partial len:173 (+),score=14.71 R_Transcript_220562:3-521(+)
VNVSLTIFHFFHLEGSVELAAVGVSVSVFNLVSKLFNVPLLNITTSFVAEEDALISMQKESSIQGGEGIQTTVLIVMPLCLSKPISWVYIWYCCVTDKHENKKALPSVSTSLILAAGLGLAEAVALSVGSGFLMNIMGISVVCLSWLFMYLCLSEFNITSSSSCCIFWLLGV*

Click here to download the sequence:
Link to NCBI Protein BLAST