Transcript Information: R_Transcript_220576.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value5.3E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3317610997005
Replicate 20.090112877323168
Replicate 30
Condition 2: 8 Hour
Replicate 10.31526864738942
Replicate 20.76775559969736
Replicate 31.2464625318721
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.596956994323


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220576.p1 GENE.R_Transcript_220576~~R_Transcript_220576.p1 ORF type:complete len:233 (+),score=28.42,MatE|PF01554.14|5.9e-27,MatE|PF01554.14|7.4e+03,MatE|PF01554.14|0.0028 R_Transcript_220576:457-1155(+)
ATGGGAAGTGCACTGGACACATTTTGCGGGCAATCATATGGAGCAAAGCAATACCGCATGCTAGGCATACAGATGCAGAGAGCTATTCTTGTTCTTCTCTTCACCAGCATTCCCCTTGCATTTATATGGGCAAACACTGGCCATATTCTTGCATTCCTAGGACAAGATCCAGAAATCTCAGCTGAAGCAGGGGTCTACGCTCGTTACATGATTCCGAGCATATTTGCATACAGTATACTTGAATGTCAAATCAGATTCCTTCAAGCTCAAAACAATGTTCTTCCTATGTTACCGATTGCTGGATTTACGACTCTACTGCATATACTTCTTTGTTGGCTCATGGTGTACAAGATAGGCTTAGGGAACAAAGGCGCTGCTGTGTCGAGTGCCATTTCTTATTGGATTAATGTTCTCTTTTTGGCTGTCTATGTGAGGGGATCTCCTGCTTGCAAGAAGACTTGGACTGGTTTCTCAAAGGAGGCCTTTAGGGGTATCCCAAAGTTTCTCAAACTTGCTATTCCTTCAACTATCATGTTGTGCTTGGAGATATGGTCATTTGAAATGGTCGTTCTACTGGCAGGACTTCTTCCAAATCCAAAACTTGAAACTTCTGTTCTGTCAATCAGCCTTAACACATGTGCAATGAGATTCATGATGCCTCTAGGACTAAGTGGAGCAGTAAGGTGCACACATTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220576.p1 GENE.R_Transcript_220576~~R_Transcript_220576.p1 ORF type:complete len:233 (+),score=28.42,MatE|PF01554.14|5.9e-27,MatE|PF01554.14|7.4e+03,MatE|PF01554.14|0.0028 R_Transcript_220576:457-1155(+)
MGSALDTFCGQSYGAKQYRMLGIQMQRAILVLLFTSIPLAFIWANTGHILAFLGQDPEISAEAGVYARYMIPSIFAYSILECQIRFLQAQNNVLPMLPIAGFTTLLHILLCWLMVYKIGLGNKGAAVSSAISYWINVLFLAVYVRGSPACKKTWTGFSKEAFRGIPKFLKLAIPSTIMLCLEIWSFEMVVLLAGLLPNPKLETSVLSISLNTCAMRFMMPLGLSGAVRCTHY*

Click here to download the sequence:
Link to NCBI Protein BLAST