Transcript Information: R_Transcript_220577.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value2E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2018410505165
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.8061190106089
Replicate 21.5643415279842
Replicate 31.1204697913819
Condition 3: 24 Hour
Replicate 10
Replicate 20.09076238226575
Replicate 32.2518214698454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220577.p1 GENE.R_Transcript_220577~~R_Transcript_220577.p1 ORF type:complete len:243 (+),score=16.12,MatE|PF01554.14|1e-23,MatE|PF01554.14|4.5e+03 R_Transcript_220577:1427-2155(+)
ATGTCTCAAGTCTTAAACTCCATTGTGCGTACATGGTTCGCTATCCTTAGCTTGAAGCTTCTTCTCCATTGTGCATGTGTTGTGGTACAAAGCTTGGAGATATGGTCATTTGAAATGGTCGTTCTACTGGCAGGACTTCTTCCAAATCCAAAACTTGAAACTTCTGTTCTGTCAATCAGCCTTAACACATGTGCAATGAGATTCATGATGCCTCTAGGACTAAGTGGAGCAGTAAGTACTAGAGTTTCGAATGAACTGGGTGCTGGAAGACCTTATCAAGCTCGTTTAGCAGTATGCATATCCATGTTGATAGTGGGTACTGAGGGAGTTACAGTTGCTTGTGTGTTGATTTTCGGTCGTAATCTATGGGGATATTGCTATAGCTCGGAAGAAGAGGTTGTTAAATATGTTGGAAAAATGTTGCTTCTTGTGGCAGGTGCACACATTATTGATGGCGTTCAGTCTGTGCTTTCAGGCACGGCTAGAGGATGTGGATGGCAAAGGATTGGAGCCGTTGTCAATTTAGGAGCTTATTACCTAGTAGGCCTTCCTTGTGCTTTCTTTTTAGCATTTGTGTTTCGCGTTGGTGGCGAGGGATTGTGGATGGGAATCATAGCCGCGTTACTTGTCCAAGCGTCGTTACTTCTTATCATAACATTACGAACTGATTGGGATAAAGAAGCAAAGGAAGCAGCAAATAGGGTGCACAATTCAACGGTCGTGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220577.p1 GENE.R_Transcript_220577~~R_Transcript_220577.p1 ORF type:complete len:243 (+),score=16.12,MatE|PF01554.14|1e-23,MatE|PF01554.14|4.5e+03 R_Transcript_220577:1427-2155(+)
MSQVLNSIVRTWFAILSLKLLLHCACVVVQSLEIWSFEMVVLLAGLLPNPKLETSVLSISLNTCAMRFMMPLGLSGAVSTRVSNELGAGRPYQARLAVCISMLIVGTEGVTVACVLIFGRNLWGYCYSSEEEVVKYVGKMLLLVAGAHIIDGVQSVLSGTARGCGWQRIGAVVNLGAYYLVGLPCAFFLAFVFRVGGEGLWMGIIAALLVQASLLLIITLRTDWDKEAKEAANRVHNSTVVC*

Click here to download the sequence:
Link to NCBI Protein BLAST