Transcript Information: R_Transcript_220579.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1941189409629
Replicate 20.098113553347187
Replicate 30.21408165977713
Condition 2: 8 Hour
Replicate 10.91535943728019
Replicate 21.358371326801
Replicate 32.4597977008936
Condition 3: 24 Hour
Replicate 10
Replicate 20.20612391486521
Replicate 32.4546958527362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220579.p1 GENE.R_Transcript_220579~~R_Transcript_220579.p1 ORF type:complete len:214 (+),score=18.51,MatE|PF01554.14|6.7e-24 R_Transcript_220579:1427-2068(+)
ATGTCTCAAGTCTTAAACTCCATTGTGCGTACATGGTTCGCTATCCTTAGCTTGAAGCTTCTTCTCCATTGTGCATGTGTTGTGGTACAAAGCTTGGAGATATGGTCATTTGAAATGGTCGTTCTACTGGCAGGACTTCTTCCAAATCCAAAACTTGAAACTTCTGTTCTGTCAATCAGCCTTAACACATGTGCAATGAGATTCATGATGCCTCTAGGACTAAGTGGAGCAGTAAGTACTAGAGTTTCGAATGAACTGGGTGCTGGAAGACCTTATCAAGCTCGTTTAGCAGTATGCATATCCATGTTGATAGTGGGTACTGAGGGAGTTACAGTTGCTTGTGTGTTGATTTTCGGTCGTAATCTATGGGGATATTGCTATAGCTCGGAAGAAGAGGTTGTTAAATATGTTGGAAAAATGTTGCTTCTTGTGGCAGGTGCACACATTATTGATGGCGTTCAGTCTGTGCTTTCAGGCACGGCTAGAGGATGTGGATGGCAAAGGATTGGAGCCGTTGTCAATTTAGGAGCTTATTACCTAGTAGGCCTTCCTTGTGCTTTCTTTTTAGCATTTGTGTTTCGCGTTGGTGGCGAGGCAAAGGAAGCAGCAAATAGGGTGCACAATTCAACGGTCGTGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220579.p1 GENE.R_Transcript_220579~~R_Transcript_220579.p1 ORF type:complete len:214 (+),score=18.51,MatE|PF01554.14|6.7e-24 R_Transcript_220579:1427-2068(+)
MSQVLNSIVRTWFAILSLKLLLHCACVVVQSLEIWSFEMVVLLAGLLPNPKLETSVLSISLNTCAMRFMMPLGLSGAVSTRVSNELGAGRPYQARLAVCISMLIVGTEGVTVACVLIFGRNLWGYCYSSEEEVVKYVGKMLLLVAGAHIIDGVQSVLSGTARGCGWQRIGAVVNLGAYYLVGLPCAFFLAFVFRVGGEAKEAANRVHNSTVVC*

Click here to download the sequence:
Link to NCBI Protein BLAST