Transcript Information: R_Transcript_220581.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value3.9E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72484682491663
Replicate 20.07579891847039
Replicate 30
Condition 2: 8 Hour
Replicate 10.17679324871657
Replicate 21.2108780780425
Replicate 31.3105856043601
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.79016984429232


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220581.p1 GENE.R_Transcript_220581~~R_Transcript_220581.p1 ORF type:3prime_partial len:277 (+),score=51.66,MatE|PF01554.14|7.9e-38 R_Transcript_220581:170-997(+)
ATGGAAGTGCAAGAAGCTGGTGTTAACTTAGATAACAATATTGAAGCTCCATTGATTATATCAGCTAAGAGTAGTGAAGATATCGACTCGAAATGGGACAAAAATGTCATATGCAAGGAACTGAAGAAGCAGCTCCAATTGGCAGGGCCACTAATGTCATACAATTTCTTGATGTATGCTCTACAGGTGGTCTCAGTTATGTTTGTTGGCCATCTTGGTGAACTCCCTCTCTCTGGTGCTTCTATGGCTACTTCTTTTGCCTCCGTCACTGGTTTCAGCTTGCTGAAAGGAATGGGAAGTGCACTGGACACATTTTGCGGGCAATCATATGGAGCAAAGCAATACCGCATGCTAGGCATACAGATGCAGAGAGCTATTCTTGTTCTTCTCTTCACCAGCATTCCCCTTGCATTTATATGGGCAAACACTGGCCATATTCTTGCATTCCTAGGACAAGATCCAGAAATCTCAGCTGAAGCAGGGGTCTACGCTCGTTACATGATTCCGAGCATATTTGCATACAGTATACTTGAATGTCAAATCAGATTCCTTCAAGCTCAAAACAATGTTCTTCCTATGTTACCGATTGCTGGATTTACGACTCTACTGCATATACTTCTTTGTTGGCTCATGGTGTACAAGATAGGCTTAGGGAACAAAGGCGCTGCTGTGTCGAGTGCCATTTCTTATTGGATTAATGTTCTCTTTTTGGCTGTCTATGTGAGGGGATCTCCTGCTTGCAAGAAGACTTGGACTGGTTTCTCAAAGGAGGCCTTTAGGGGTATCCCAAAGTTTCTCAAACTTGCTATTCCTTCAACTATCATGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220581.p1 GENE.R_Transcript_220581~~R_Transcript_220581.p1 ORF type:3prime_partial len:277 (+),score=51.66,MatE|PF01554.14|7.9e-38 R_Transcript_220581:170-997(+)
MEVQEAGVNLDNNIEAPLIISAKSSEDIDSKWDKNVICKELKKQLQLAGPLMSYNFLMYALQVVSVMFVGHLGELPLSGASMATSFASVTGFSLLKGMGSALDTFCGQSYGAKQYRMLGIQMQRAILVLLFTSIPLAFIWANTGHILAFLGQDPEISAEAGVYARYMIPSIFAYSILECQIRFLQAQNNVLPMLPIAGFTTLLHILLCWLMVYKIGLGNKGAAVSSAISYWINVLFLAVYVRGSPACKKTWTGFSKEAFRGIPKFLKLAIPSTIML

Click here to download the sequence:
Link to NCBI Protein BLAST