Transcript Information: R_Transcript_220582.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52365051919275
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 21.8328591673103
Replicate 30.66952662124378
Condition 3: 24 Hour
Replicate 10.18817874776807
Replicate 20.090390405289251
Replicate 30.17940741546637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220582.p1 GENE.R_Transcript_220582~~R_Transcript_220582.p1 ORF type:complete len:244 (+),score=14.10,MatE|PF01554.14|1e-23,MatE|PF01554.14|1.1e+04 R_Transcript_220582:1427-2158(+)
ATGTCTCAAGTCTTAAACTCCATTGTGCGTACATGGTTCGCTATCCTTAGCTTGAAGCTTCTTCTCCATTGTGCATGTGTTGTGGTACAAAGCTTGGAGATATGGTCATTTGAAATGGTCGTTCTACTGGCAGGACTTCTTCCAAATCCAAAACTTGAAACTTCTGTTCTGTCAATCAGCCTTAACACATGTGCAATGAGATTCATGATGCCTCTAGGACTAAGTGGAGCAGTAAGTACTAGAGTTTCGAATGAACTGGGTGCTGGAAGACCTTATCAAGCTCGTTTAGCAGTATGCATATCCATGTTGATAGTGGGTACTGAGGGAGTTACAGTTGCTTGTGTGTTGATTTTCGGTCGTAATCTATGGGGATATTGCTATAGCTCGGAAGAAGAGGTTGTTAAATATGTTGGAAAAATGTTGCTTCTTGTGGCAGGTGCACACATTATTGATGGCGTTCAGTCTGTGCTTTCAGGCACGGCTAGAGGATGTGGATGGCAAAGGATTGGAGCCGTTGTCAATTTAGGAGCTTATTACCTAGTAGGCCTTCCTTGTGCTTTCTTTTTAGCATTTGTGTTTCGCGTTGGTGGCGAGGGATTGTGGATGGGAATCATAGCCGCGTTACTTGTCCAAGCGTCGTTACTTCTTATCATAACATTACGAACTGATTGGGATAAAGAAGTTAGTATTAATTTGTTGGTCGGGGTTAAGTTTTGTTTATCTAATTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220582.p1 GENE.R_Transcript_220582~~R_Transcript_220582.p1 ORF type:complete len:244 (+),score=14.10,MatE|PF01554.14|1e-23,MatE|PF01554.14|1.1e+04 R_Transcript_220582:1427-2158(+)
MSQVLNSIVRTWFAILSLKLLLHCACVVVQSLEIWSFEMVVLLAGLLPNPKLETSVLSISLNTCAMRFMMPLGLSGAVSTRVSNELGAGRPYQARLAVCISMLIVGTEGVTVACVLIFGRNLWGYCYSSEEEVVKYVGKMLLLVAGAHIIDGVQSVLSGTARGCGWQRIGAVVNLGAYYLVGLPCAFFLAFVFRVGGEGLWMGIIAALLVQASLLLIITLRTDWDKEVSINLLVGVKFCLSNC*

Click here to download the sequence:
Link to NCBI Protein BLAST