Transcript Information: R_Transcript_220719.p1


Annotated TAIR IDAT5G07270.1
Annotated Gene NameXB3 Ortholog 3 in Arabidopsis thaliana
Annotated Gene Symbol(s)XBAT33
Annotation TypeOrtholog
Chromosome Positionchr5:2280821-2283384 | Forward length=513
E-Value1.1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6786989636903
Replicate 25.1324289906506
Replicate 34.0723089059827
Condition 2: 8 Hour
Replicate 17.8898898163346
Replicate 26.9567187950355
Replicate 38.0673824979498
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 27.8418698277608
Replicate 34.6207376561228


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220719.p1 GENE.R_Transcript_220719~~R_Transcript_220719.p1 ORF type:internal len:90 (-),score=29.18,Ank_5|PF13857.2|43,Ank_5|PF13857.2|1.2e-07,Ank_2|PF12796.3|1e-08,Ank_4|PF13637.2|3.4e+03,Ank_4|PF13637.2|9.6e-08,Ank_3|PF13606.2|4.9e+02,Ank_3|PF13606.2|1.1e-06,Ank|PF00023.26|1.7e+03,Ank|PF00023.26|2.4e-06 R_Transcript_220719:1-267(-)
GGGTATAGAGAAAAAAGAAAAAAGAAAAAGATGGGCAATTCATTTGGTTGCTCAGCCTCAGGTGAAAGGCTTGTATCTGCTGCAAGAGATGGGGATTTGGTTGAGGCAAAGATGCTTTTAGAATGTAATCCTTGTCTTGCAAAGTACTCCACTTTTGGTGGCCTTAATTCCCCCCTTCATTTTGCTGCTGCTAAGGGTCATAATGAGATTGTGACTTTGTTGCTTGAGAATGGGGCTGATGTCAATTCCAGAAATTACTGTGGGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220719.p1 GENE.R_Transcript_220719~~R_Transcript_220719.p1 ORF type:internal len:90 (-),score=29.18,Ank_5|PF13857.2|43,Ank_5|PF13857.2|1.2e-07,Ank_2|PF12796.3|1e-08,Ank_4|PF13637.2|3.4e+03,Ank_4|PF13637.2|9.6e-08,Ank_3|PF13606.2|4.9e+02,Ank_3|PF13606.2|1.1e-06,Ank|PF00023.26|1.7e+03,Ank|PF00023.26|2.4e-06 R_Transcript_220719:1-267(-)
GYREKRKKKKMGNSFGCSASGERLVSAARDGDLVEAKMLLECNPCLAKYSTFGGLNSPLHFAAAKGHNEIVTLLLENGADVNSRNYCGQ

Click here to download the sequence:
Link to NCBI Protein BLAST