Transcript Information: R_Transcript_22080.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.108665669408
Replicate 225.381603667803
Replicate 325.371386578017
Condition 2: 8 Hour
Replicate 121.231414542864
Replicate 221.65325899811
Replicate 325.274394534716
Condition 3: 24 Hour
Replicate 122.376596918142
Replicate 222.055258890577
Replicate 324.519770440385


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22080.p1 GENE.R_Transcript_22080~~R_Transcript_22080.p1 ORF type:complete len:158 (+),score=26.76,DUF4050|PF13259.2|4e-10,DUF4050|PF13259.2|2.3e-13 R_Transcript_22080:267-740(+)
ATGGGTGCTTATCTTGCATGTTGTATGAAGCCTGAGTCTATAGCATCCTTGGACAAGCAACCAAGAGAACTGAGAACTCGAGGACAAACAAGAAGGATACCTAGCACTTCTGGAGATTTTTGGACCACAAGTGTGTGTGATATGGACAACAGTGCAGTGCAGTCACAAGGAAGTATATCATCACATAGTGCGTCGATCCAAACTCTTGATGCCCATACCAGTGTCAGCGGTTCTAATCCCCCTTCTGAATTTGTAAATCATGGTCTTCTTCTCTGGAATCAGACGAGGCAGCGGTGGGTAGGTAATAAGAAGCAAAATATCAAAGGACAGGAAGCTCGAGATCCAAAATTAAGTTGGAACACAACATATGAAAGCTTACTTGGGACCAACAAGCCATTTGCCCAGCCAGTTCCTCTCGCTGAAATGGTAGATTTTCTTGTGGACATCTGGGAGCAGGAAGGGATGTATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22080.p1 GENE.R_Transcript_22080~~R_Transcript_22080.p1 ORF type:complete len:158 (+),score=26.76,DUF4050|PF13259.2|4e-10,DUF4050|PF13259.2|2.3e-13 R_Transcript_22080:267-740(+)
MGAYLACCMKPESIASLDKQPRELRTRGQTRRIPSTSGDFWTTSVCDMDNSAVQSQGSISSHSASIQTLDAHTSVSGSNPPSEFVNHGLLLWNQTRQRWVGNKKQNIKGQEARDPKLSWNTTYESLLGTNKPFAQPVPLAEMVDFLVDIWEQEGMYD*

Click here to download the sequence:
Link to NCBI Protein BLAST