Transcript Information: R_Transcript_220842.p1


Annotated TAIR IDAT1G56440.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR5
Annotation TypeHomolog
Chromosome Positionchr1:21138765-21141482 | Reverse length=494
E-Value9E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.089380423114
Replicate 27.0782982464035
Replicate 36.7678997443178
Condition 2: 8 Hour
Replicate 17.0489611211767
Replicate 210.079336890534
Replicate 37.7694393943323
Condition 3: 24 Hour
Replicate 16.6090657170663
Replicate 26.5163264903978
Replicate 37.7104414237934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220842.p1 GENE.R_Transcript_220842~~R_Transcript_220842.p1 ORF type:complete len:264 (+),score=67.40,RPAP3_C|PF13877.2|3.5e-23,RPAP3_C|PF13877.2|1.2e+04 R_Transcript_220842:155-946(+)
ATGGATCAAAGAGAAGTGGGGAACCACGTGAGAGCACTCCATGCCATTCTTGCAAAAGCAGCTCAAGCTACTGCAAGACCTACACAAGGTGTGAAAGAAGTTGAGAGAAAGGTTGATGCAGATAGGCTTCAAAAGGGTGTCCAGTATGTACCTGATAAGAGTAAGACAGGAGTAGATATACTTCCTGATAAAACACAGGTATCAAGGAAGAAACCTTTGGACTCTAGTGAAACAGAGAACAAAAGCATGACATCTGAAGTGAAAAGTAGACAAGTAAATGGTTTGCATGAAGCTGCAGCAGAAAGTTCTCATTTGAAAATGGATAAAACTAGCAAAAAGGAGCTGGCACCATCAGTTCAAGAGCTTGCTTCTCGGGCTGCATCTCGAGCTTTGGCAGAAGCTGCTAAAAACATCAATACACCAAGCTCAGCTTATCAATTTGAGGCTTATTGGCGAGGGTTTTCTGGCGACCATTCTCTACAGGCTCGCTTGTTGAAGGTTACTCCACCAGATGCGCTGCCACAGATATTTAAGCATGCCTTGACTGCGCGTTTACTGGTTGATTTAATCAAGTGCCTTGCATCCCTTTTCACGGAGGAGACCGAGCTAGTTCTCAAGTATTTAGAAAATTTGACCAAGGTCCCAAGATTTGACATGATCATCATGTGTCTTCCATCAGCAGACAAAGCTGATCTTTGCAGGACATGGGATGAAGTATTTCTTAGCAAGGCTGCTCCTATTGAATTTGCTGAAGTACTCAGCGAACTCCATCCCAGGTATTGCCCTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220842.p1 GENE.R_Transcript_220842~~R_Transcript_220842.p1 ORF type:complete len:264 (+),score=67.40,RPAP3_C|PF13877.2|3.5e-23,RPAP3_C|PF13877.2|1.2e+04 R_Transcript_220842:155-946(+)
MDQREVGNHVRALHAILAKAAQATARPTQGVKEVERKVDADRLQKGVQYVPDKSKTGVDILPDKTQVSRKKPLDSSETENKSMTSEVKSRQVNGLHEAAAESSHLKMDKTSKKELAPSVQELASRAASRALAEAAKNINTPSSAYQFEAYWRGFSGDHSLQARLLKVTPPDALPQIFKHALTARLLVDLIKCLASLFTEETELVLKYLENLTKVPRFDMIIMCLPSADKADLCRTWDEVFLSKAAPIEFAEVLSELHPRYCPR*

Click here to download the sequence:
Link to NCBI Protein BLAST