Transcript Information: R_Transcript_220843.p1


Annotated TAIR IDAT1G56440.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR5
Annotation TypeOrtholog
Chromosome Positionchr1:21138765-21141482 | Reverse length=494
E-Value1E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7428658690765
Replicate 25.8551774581398
Replicate 38.2344481554796
Condition 2: 8 Hour
Replicate 18.6420699813807
Replicate 28.7202567528806
Replicate 310.519234041444
Condition 3: 24 Hour
Replicate 19.2031296947659
Replicate 27.7361583472395
Replicate 38.8218417583355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220843.p1 GENE.R_Transcript_220843~~R_Transcript_220843.p1 ORF type:complete len:459 (+),score=119.60,RPAP3_C|PF13877.2|2.3e-23,TPR_11|PF13414.2|1.5e-17,TPR_11|PF13414.2|2.3e-06,TPR_11|PF13414.2|0.74,TPR_1|PF00515.24|4.7e-08,TPR_1|PF00515.24|1.5e-06,TPR_1|PF00515.24|0.038,TPR_2|PF07719.13|2e-05,TPR_2|PF07719.13|0.0004,TPR_2|PF07719.13|16,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|0.0001,TPR_16|PF13432.2|1.6e-05,TPR_16|PF13432.2|0.0073,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|7.2e+03,TPR_8|PF13181.2|0.06,TPR_8|PF13181.2|0.046,TPR_8|PF13181.2|1.1e+04 R_Transcript_220843:1205-2581(+)
ATGTCAAAGGCTCCCAACAAGCAAAACCATGATCAACCTCTGAATTTTCAGGGATTTCTGAACGACTTACAAGACTGGGAACTTTCTCTCAAAGACAAGAACTTGAAGGGCAAATCGAATATTGCTCTGCTGAGTGAGGAAAGGCAACCTGTTGGTAAAGGGAAAGCTGTTGCTCAGCATTCGAGCAATAGTGCAAGCCAGTACCGCCCTTCTGTAAACTACGATCCACTGAGCAGTATGCCAACTAGTTTCGTGTCTGAAGACAACACTGTGGATGCAGCTTCTGAGAAAGATCTTGGTAATGAATATTTTAAGCAAAAGAAGTTTAATGAGGCTATTGATTGCTATTCTAGAAGCATTGCTCTATCGCCAACAGCTGTGGCTTATGCTAATAGAGCAATGGCGTATCTGAAGATCAAAAGATTCCGAGAGGCTGAGGATGACTGCACAGAGGCTTTGAACCTGGATGATCGGTACATAAAAGCATATTCACGCCGAGCAACAGCCAGAAAGGGACTTGGAAAACTTAGAGATTCGTTAGAGGATGTGGAGTTTGCTTTAAGGTTAGAGCCACACAATGAAGAGCTCAAGAAACAACGTGCTGAAGTGAAGTCCTTGCTTGAGAAGGCCATCCTTGCAAAAGCAGCTCGAACTACTGCAAGACCTAAACAAGGTGTGAAAGAAGTTGAGAGAAAGGTTGATGCAGATAGGCTTCAAAAGGGTGTCCAGTATGTACCTGATAAGAGTAAGACAGGAGTAGATATACTTCCTGATAAAACACAGGTATCAAGGAAGAAACCTTTGGACTCTAGTGAAACAGAGAACAAAAGCATGACATCTGAAGTGAAAAGTAGAGAAGTAAATGGCTTGCATGAAGCTGCAGCAAACAGTTCTCATTTGAAAATGGATAAAACTAGCAAAAAGGAGCTGGCACCATCAGTTCAAGAGCTTGCTTCTCGGGCTGCATCTCGAGCTTTGGCAGAAGCTGCTAAAAACATCAATACACCAAGCTCAGCTTATCAATTTGAGGCTTATTGGCGAGGGTTTTCTGGCGACCATTCTCTACAGGCTCGCTTGTTGAAGGTTACTCCACCAGATGTGCTGCCACAGATATTTAAGAATGCCTTGACTGCGCCTTTACTGGTTGATTTAATCAAGTGCCTTGCATCCCTTTTCACGGAGGAGACCGAGCTAGTTCTCAAGTATTTAGAAAATTTGACCAAGGTCCCAAGATTTGACATGATCATCATGTGTCTTCCATCAGCAGACAAAGCTGATCTTTGCAGGACATGGGATGAAGTATTTCTTAGCAAGGCTGCTCCTATTGAATTTGCTGAAGTACTCAGCGAACTCCATCCCAGGTATTGCCCTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220843.p1 GENE.R_Transcript_220843~~R_Transcript_220843.p1 ORF type:complete len:459 (+),score=119.60,RPAP3_C|PF13877.2|2.3e-23,TPR_11|PF13414.2|1.5e-17,TPR_11|PF13414.2|2.3e-06,TPR_11|PF13414.2|0.74,TPR_1|PF00515.24|4.7e-08,TPR_1|PF00515.24|1.5e-06,TPR_1|PF00515.24|0.038,TPR_2|PF07719.13|2e-05,TPR_2|PF07719.13|0.0004,TPR_2|PF07719.13|16,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|0.0001,TPR_16|PF13432.2|1.6e-05,TPR_16|PF13432.2|0.0073,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|7.2e+03,TPR_8|PF13181.2|0.06,TPR_8|PF13181.2|0.046,TPR_8|PF13181.2|1.1e+04 R_Transcript_220843:1205-2581(+)
MSKAPNKQNHDQPLNFQGFLNDLQDWELSLKDKNLKGKSNIALLSEERQPVGKGKAVAQHSSNSASQYRPSVNYDPLSSMPTSFVSEDNTVDAASEKDLGNEYFKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYLKIKRFREAEDDCTEALNLDDRYIKAYSRRATARKGLGKLRDSLEDVEFALRLEPHNEELKKQRAEVKSLLEKAILAKAARTTARPKQGVKEVERKVDADRLQKGVQYVPDKSKTGVDILPDKTQVSRKKPLDSSETENKSMTSEVKSREVNGLHEAAANSSHLKMDKTSKKELAPSVQELASRAASRALAEAAKNINTPSSAYQFEAYWRGFSGDHSLQARLLKVTPPDVLPQIFKNALTAPLLVDLIKCLASLFTEETELVLKYLENLTKVPRFDMIIMCLPSADKADLCRTWDEVFLSKAAPIEFAEVLSELHPRYCPR*

Click here to download the sequence:
Link to NCBI Protein BLAST