Transcript Information: R_Transcript_220920.p1


Annotated TAIR IDAT5G02160.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:426392-427024 | Forward length=129
E-Value1.4E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.11497635123
Replicate 224.311505745187
Replicate 322.21781315717
Condition 2: 8 Hour
Replicate 19.3893166339061
Replicate 216.308312320263
Replicate 312.556001331395
Condition 3: 24 Hour
Replicate 111.392596067883
Replicate 25.6381864833055
Replicate 39.215875657641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_220920.p1 GENE.R_Transcript_220920~~R_Transcript_220920.p1 ORF type:complete len:133 (+),score=26.98 R_Transcript_220920:309-707(+)
ATGGCTTCAACTGCGTCCCTGAAGTCCCAGTTTCTGATCAACCCTTTGAAGCCATCAGCGAGTGCAGTTACCAGTAGACCATCCGCATGTTGCACGGTTTTTCCAGTCAGACAGCGTGCAACTGACCGCAGAAAGAGGCTGTCGGTGAAGGCAGCCGTAGGAGAGCTGTCTTCTGATAGCACAACTTACTTGATTGCTGGTGCAGCCACCATTGCATTGATTGGAACTGCTTTTCCCGTCATCTTCGCTCGCAAAGATACATGCCCAGAATGTGATGGGGCAGGATTTGTAAGGAAATCAGGAGCAATGTTGAGGGCAAATGCTGCTCGGAAGGATCAAGCTCAGATTGTTTGTGCACGTTGCAATGGCCTTGGCAAACTCAATCAAATTGACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_220920.p1 GENE.R_Transcript_220920~~R_Transcript_220920.p1 ORF type:complete len:133 (+),score=26.98 R_Transcript_220920:309-707(+)
MASTASLKSQFLINPLKPSASAVTSRPSACCTVFPVRQRATDRRKRLSVKAAVGELSSDSTTYLIAGAATIALIGTAFPVIFARKDTCPECDGAGFVRKSGAMLRANAARKDQAQIVCARCNGLGKLNQIDK*

Click here to download the sequence:
Link to NCBI Protein BLAST