Transcript Information: R_Transcript_221130.p1


Annotated TAIR IDAT2G27800.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11849789-11851351 | Reverse length=442
E-Value3.6E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5996977016495
Replicate 20.66055776590601
Replicate 31.1839437409247
Condition 2: 8 Hour
Replicate 11.2655615590711
Replicate 20.80398676282915
Replicate 32.1210870837306
Condition 3: 24 Hour
Replicate 11.6508984972731
Replicate 21.536433765411
Replicate 31.8690624227013


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_221130.p1 GENE.R_Transcript_221130~~R_Transcript_221130.p1 ORF type:complete len:445 (+),score=58.33,PPR_2|PF13041.2|2.8e+03,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|6.2e-16,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|8.2e-06,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|7.3e-07,PPR_1|PF12854.3|4.4e-13,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|6.6e-07,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.076,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.0019,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|0.0003,PPR|PF01535.16|1.5e-05,PPR_3|PF13812.2|6.6e+03,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.013 R_Transcript_221130:164-1498(+)
ATGTATTTTTCTGTCAACCCTTTTATTTCCTCTTTTTGGAGGTCCTACACTCACCATGCTAGAAACCCATTTATTATACTTTCTTGTTTACATAATTTTACTCCTAATTCTAATTGTACCCCAGTTATTATAAACCCTAAACACAAATTCTTTCATATTACCATGCATACCCATGATCCCATTTCCCACTATTATTATTATTATTGTCAAGCTAACCATTATGGTTTATCATGGTATTCTACCAAGTCTCTTAGACCTTGGTTTCATAGAGCCTACAAGAAACGTGTTAATAAAAGACTTAGATTAGCTAATAAGCCTGTTCTTGATGAAACCCGGTTTAAAGAGGCTGTTTCCCAGCTTCCTGCACGATTTACTGCTCCTGATTTGCATAATGTCATTGCCCTTGAAGATGACCCTTTGGTGTCTTTAGAGCTTTTTAATTGGGCATCCAAGCAACATAGATTTGACCATAGTGTAAATACTTTTCATATTACTATTCAGAAACTTGGGCTTGCTGGAATGTTGGATGAAATGTATGATGTTGTTGATCAACTGCTTGGTAGGCCTCATTTTGGGTCTGAACCTTTGTATAATACTATCATTTATTATTTTACTCGAGCCCGAAAACTTAGCAGAGCTGTAACTGTTTTCAAGCACATGCAGAAGGTTGATAACGTGGATTCTAGGCCTTCCATTAAGACTTACAATCTTTTGTTTGCGGCTTTTGTTAGTCGTGGGAAGGATACCTATGTCAATCATATGTACATGGGTACCATGGTGTGTCTTTTTAGGCAACTGTTGAATGATGGAATTCAGCCCGATGTGTTCTGCCTCAATTCGATGATACATGGTTATGTGCTTTCTAATCATGTCAATGATGCTCTTAGGATGTTTCATCAAATGGGCGTTGTTTATAGTTGTGTGCCTGATGCGGTCACTTATAATCATCTAATTCATGGGCTCTGTGCTCAAGGCCGAACAAATAATGCTAGGGAGTTGTTTAATGAAATGAAGGGGAAAGGGTTTGTTTGTAGTGCTAAAACCTATAACTCTCTTGTGAATGCGTTGGTGCTTGTTGGAGAGCTTGAGGAAGCTGTGAGATATTTGTGGGAGATGACTGACAAGCAGAGACCAGCAGATTTCATTACTTACAACACACTTTTGGATGAGTTTTGCCGAAAAGGAAGAGCCTCTGATGCATTGAGTTTGATAGAAGAGTTTAAGGAGAAACATCTTGTTGATGGTCCTAGTTACAGAAAGCTATCACATGTAATCAAAGATGGCTTTGCAAATGACAGCAAGGACTTCCGTAGAGATAAGGGTTGTTCACTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_221130.p1 GENE.R_Transcript_221130~~R_Transcript_221130.p1 ORF type:complete len:445 (+),score=58.33,PPR_2|PF13041.2|2.8e+03,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|6.2e-16,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|8.2e-06,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|7.3e-07,PPR_1|PF12854.3|4.4e-13,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|6.6e-07,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.076,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.0019,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|0.0003,PPR|PF01535.16|1.5e-05,PPR_3|PF13812.2|6.6e+03,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.013 R_Transcript_221130:164-1498(+)
MYFSVNPFISSFWRSYTHHARNPFIILSCLHNFTPNSNCTPVIINPKHKFFHITMHTHDPISHYYYYYCQANHYGLSWYSTKSLRPWFHRAYKKRVNKRLRLANKPVLDETRFKEAVSQLPARFTAPDLHNVIALEDDPLVSLELFNWASKQHRFDHSVNTFHITIQKLGLAGMLDEMYDVVDQLLGRPHFGSEPLYNTIIYYFTRARKLSRAVTVFKHMQKVDNVDSRPSIKTYNLLFAAFVSRGKDTYVNHMYMGTMVCLFRQLLNDGIQPDVFCLNSMIHGYVLSNHVNDALRMFHQMGVVYSCVPDAVTYNHLIHGLCAQGRTNNARELFNEMKGKGFVCSAKTYNSLVNALVLVGELEEAVRYLWEMTDKQRPADFITYNTLLDEFCRKGRASDALSLIEEFKEKHLVDGPSYRKLSHVIKDGFANDSKDFRRDKGCSL*

Click here to download the sequence:
Link to NCBI Protein BLAST