Transcript Information: R_Transcript_221166.p1


Annotated TAIR IDAT2G48075.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G63050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19664143-19664622 | Reverse length=159
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7664155762631
Replicate 21.4674833624294
Replicate 30.73892701923072
Condition 2: 8 Hour
Replicate 10.39493330560073
Replicate 20.7213187690705
Replicate 30.39035721764273
Condition 3: 24 Hour
Replicate 10.61714535558344
Replicate 20.8300366249142
Replicate 31.5297858114498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_221166.p1 GENE.R_Transcript_221166~~R_Transcript_221166.p1 ORF type:5prime_partial len:186 (+),score=29.66 R_Transcript_221166:2-559(+)
AAAATTTGTCCCATTTTAGCTAGGCATCTTGCTTCCAAACACTTAATTAATTTAGCCATGCATGAAATTAGAGGCAAAGATATTCAACCCCTCCACATTTGCCAAAGGATTTACAACGCCATTCTTCATACAACAAATATCATCATGGTCCTCATAAGAAGCTCCAAAATCTCAAACAAAAATAGCCCTGAAGTGGAGATCAAATTCAAAGATACAATTAGTATAAGCAATTCCCATGACGACGAGACTCAATCACTGGAGGCTAATCAAGTGGCTGCTGCTCAAATTGATGAAGATGAAATCACAACAAAGTTGAATAACTTAGAGGATGAAAATGAGAAAGGCCCAAAAACAAGAACTAGCATAAAAGGTAAAGAGAAAATGGTAGCAGAGAGATTAGATGAACAAGAAAACTTGCAAAATAATGGGGTTCGTGGGCCTCTAATGGGCCGTGTTTCTAGAGTTTTTTCGAATATTAATGATAAATCTGATGAATTTATTCGTAGCAGGAAGGCAGCGATGCGAAAAAATTATAGTTTGGATTTTAAGAAAGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_221166.p1 GENE.R_Transcript_221166~~R_Transcript_221166.p1 ORF type:5prime_partial len:186 (+),score=29.66 R_Transcript_221166:2-559(+)
KICPILARHLASKHLINLAMHEIRGKDIQPLHICQRIYNAILHTTNIIMVLIRSSKISNKNSPEVEIKFKDTISISNSHDDETQSLEANQVAAAQIDEDEITTKLNNLEDENEKGPKTRTSIKGKEKMVAERLDEQENLQNNGVRGPLMGRVSRVFSNINDKSDEFIRSRKAAMRKNYSLDFKKV*

Click here to download the sequence:
Link to NCBI Protein BLAST