Transcript Information: R_Transcript_22119.p1


Annotated TAIR IDAT3G52140.4
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19333232-19341295 | Forward length=1419
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.905058860256
Replicate 228.807160416454
Replicate 335.455505941724
Condition 2: 8 Hour
Replicate 130.030484154709
Replicate 232.456301069063
Replicate 339.673140512069
Condition 3: 24 Hour
Replicate 143.397036447306
Replicate 237.937526896169
Replicate 339.511770697092


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22119.p1 GENE.R_Transcript_22119~~R_Transcript_22119.p1 ORF type:complete len:1422 (+),score=361.65,CLU|PF13236.2|9.5e-85,eIF3_p135|PF12807.3|4.8e+03,eIF3_p135|PF12807.3|5.7e-48,eIF3_p135|PF12807.3|1.8e+03,TPR_12|PF13424.2|0.0028,TPR_12|PF13424.2|2.9e-10,TPR_12|PF13424.2|6e-14,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|9.8e-06,TPR_10|PF13374.2|0.059,TPR_10|PF13374.2|2.4e-07,TPR_10|PF13374.2|40,CLU_N|PF15044.2|1e-20,TPR_11|PF13414.2|5.2,TPR_11|PF13414.2|0.031,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|0.016 R_Transcript_22119:272-4537(+)
ATGGCAGGCAAGTCGAATAAAGGGAGGAACCGTAATAAGGGTTCTCAATCACATATGGCTCCTCCTCCTGTTGTTAACTCTTCTGAACCTCCGTCGCCGCCTGTGAATGATGATAATAGTCATACTACTCCTACTGATAAACCAACACCAACACCAACACCAAATGCGACAGACCCTCCTCCTGTTAATCCCCAACCTAATGGTGGTGACTCTCTTACCTCTGAATCTGAGGTTAAGCCCTCTCAACCTACCCATTCTAGGCAATCCCAAGGTGAACTCCATCTTTATCCTGTTTCTGTCAAGACGCTTGGTGGTGAGAAGTTGGAATTACAACTAAATCCTGGCGATTCTGTGATGGATGTAAGGCAGTTTCTCCTTGATGCACCAGAGACATGTTTTTTTACATGTTATGATTTGTTACTGCATGCAAAAGGTTCAGTCCATCATTTGGAAGACTACAATGAAATTTCTGAGGTTGCTGACATAACAAGTGGCCAATGCTCCCTGGAAATGATTGCTGCTTTATATGATGACAGATCTGTAAGGGCACATGTTCACCGCACAAGGGAATTGCTATCTCTTTCAACCCTTCATGCATCACTATCAACTTCTCTTGCTTTGCAGCATGAGACGTCACGCAGTGCTTCTGGAAGCACACAAGATTCAGTTAAAGCAGAAGTTCCAGAATTGGATGGTTTTGGTTTCATGGAGGATATTACTGGCTGTCTTAGTAGATTGTGCTCTTCCTCCTCTAGGGATATTAAGTGTGTTGAAAGTATAGTATTCTCGTCATTCAACCCGCCTCCAAGTCATAGAAGGCTTGTTGGAGATTTGATTTATTTGGATGTGGTAACTCTCGAGGGAGGCAAGTTTTGCATCACAGGAACAACAAGAATGTTCTATGTTAATTCAAGTTCTGGTAACATTCTGGATCCGAGGCCAACCAAAGGTGCCTTTGAAGCAACTACCCTTATTGGACTGTTGCAAAAAATTAGTTCAAGGTTCAAAAAAGCTTTTCGGGAAAATTTAGAGAGGAAGGCTGCTGCTCATCCATTTGAAAATGTTCAATCTTTGTTACCACCAAATGCATGGCTTGGTTCATATCCAATGCCTGACCACAATCGTGATGCTGCGAGGGCAGAGGATGCACTAACACTTACATATGGAAGTGAGCTGATTGGCATGCAAAGGGATTGGAATGAAGAGTTGCAGTCCTGTCGAGAGTTCCCTCACACAACTCCACAGGAAAGGATCCTACGTGATAGAGCTCTGTATAAAGTGACTTCTGACTTTGTTGATGCTGCAACAAATGGTGCTATTGGAGTCATTAACAGATGTATACCTCCAATTAATCCAACAGATCTTGAGTGTTTTCACATGTACGTTCACAACAATATATTCTTCAGTTTTGCTATTGATGCGGACCTGGAGCTGCTGTCCAAGAAGCACAGACCAAATAGCAGTGGGAAAGTCAACCAGCAAAATTTGAGTGGAAAGACTCTGGAAAAATCCTCTGATAGAGCTGGTGAAATCTTCAATGGTGTTGAAGTGAATTGTTCTTACAGAGATGGTGAGAATGGTGTTCTGGATGTAGCTTCTGATATATCTGCCGAAGTTCAAGCGGCTGATAGTGAGCAAGCCACATATGCTTCTGCAAATAATGATCTTAAAGGCACCAAGGCATACCAGGAAGCTGATGTTCCTGGGCTTTATAATCTTGCCATGGCCATTATTGATTATAGGGGTCACAGGGTGGTTGCACAGAGTGTCTTACCAGGCATCCTTCAAGGTGATAAATCAGATTCTCTTTTATATGGCTCTGTGGACAATGGAAAAAAGATATGCTGGAATGAAGACTTTCATTGCAAGGTACTTGAGGCTGCGAAACGCCTTCACTTGAAGGAACATACTGTGTGTGATGATTCTGGAAAGGCATTCAGATTAGCTGCCCCTGTGGAATGCAAGGGTATAGTTGGTAGTGATGACAGGCATTATCTTCTCGACTTGATGAGAGTCACACCTCGTGATGCTAATTACATTGGACCTGGTTCTCGGTTCTGCATTTTGAGGCCTGAGTTAATAAAAGCATTCTGCCAAGCTAAAGCTGCAGGGAGGCCTAATAGTACGCCTGATTCAGAAGCGGATGGTTGCTTGGGTGCTGAATCCTCTAATACTAATCTTGAGGTGGGATCTGATTCAAATGCAGAAGTAGCTTTGAGCAGCCAGGACCCGGCTATTGAGAGAATTATTGATACTGTCGAAGATGGCCTGTCTGCAGTCACTGGATGCAGTGAAGCAAATGAACAGATATGCTTCAATCCTAATGTATTTACAGATTTCAAATTAGCTGGATCCCCAGAAGAGATAGCAGTAGATGAAGATAATGTGAGGAAAGCAAGCTCATATCTCTCAAATGTAGTACTTCCAAAGTTTATACAGGATCTTTGCTCTCTTGAAGTTTCACCAATGGATGGTCAGACATTGACAGAAGCACTTCATGCCCACGGGATCAACGTCCGCTATATTGGAAAAATAGCTGAAGGAACCAAACATATGCCTCATCTTTGGGATCTTTGTACTAACGAGATTGCCGTAAGGGCCGCAAAGCACATGCTTAAGGATGTCTTGAGAGACACAGAGGACCATGATCTTGGCTCTTCAATAGCCCATTTCTTTAACTGTTTCTTTGGAAAATCTCAAGCGGCTACAGAGAAAAATAGCAGTAACAACTTGCCTCGACGATCTCAGAAAAAGGATCAAGCTGGACATCAGAAGTCTTCCAAGGGAAAGTCCAGGTGGAGGAATGGATCATCTGCTAAAAGTAGTTCATCATGGTGCTTAGGCATAAGCTCTGATGGACTATGGTCTGATATCTTAGAATTTGCTAAAAGCAAATATCAGTTTGATCTGCCGGAGGATGCAAGATCACGGGTGAAGAAAGTTTCAGTTATTCGAAATCTTTGCCAAAAGGCAGGAATAACTCTTGCGGCTCGTAAGTATGATCTTGAAGCTGTAGCATCTTTCCAAACATCAGACATCTTGAATATCCAGCCTGTTGTGAAGCATGCAATACCTGTATGCTCAGAAGCCAAGAATCTTGTTGAGACCGGAAAGTTCCAGTTGGCTGAGGGAATGCTTGGTGAGGCATACACAGTGTTTTCAGAGGCATTTTCCATATTGCAGCAGGTGACTGGTCCAATGCATAGAGAGGTCGCTAACTGCTGTAGGTATCTCGCCATGGTTCTTTATCATGCTGGCGACATGGCTGGAGCTATAATGCAGCAGCACAAAGAACTGATCATAAATGAGCGTTGCCTTGGTTTGGATCATCCTGATACTGCACACAGTTATGGCAACATGGCTCTTTTCTATCATGGGCTTAACCAAACTGAGCTTGCATTACGTCACATGTCAAGAGCATTGCTTCTACTGAGCTTGTCTTCTGGCCCTGATCACCCTGATGTAGCTGCAACCTTCATTAATGTTGCAATGATGTATCAAGATATTGGAAAGATGGACACAGCTCTTAGATACCTGCAAGAAGCTCTGAAGAAGAATGAGAGGCTTCTTGGTGAGGAGCATATCCAAACTGCTGTTTGCTATCATGCTCTGGCTATTGCTTTTAATTGCATGGGGGCCTATAAACTTTCTCATCAGCATGAAAAGAAAACTTACGAGATACTGGTCAAACAACTTGGAGAGGAGGATTCTAGGACCCAGGACTCACAAAATTGGATGAAGACATTTAAAATGCGTGAGCTTCAGATGAATGCACAAAAACAGAAGGGGCAAAATCTAGATGCAGCTACTGCTAAGAAGGCAGTAGATATTATAAAGGCATTGCAGGCTGCCGCAGCAGCTGGAGGATCTAAGGGTTCCGCTTCCCTGAATAAGTCTTTGAATGCAGCTATAATGAGTGATGCTGTACCCCGTGCGAGAGGAGTTGATGAAAGGGGAGCACGTGCTGCAGCTGAAGCTCGGAAGAAAGCAGCTGCAAAGGCACACTTGACACACTCTCGTGCCGTCCCTATGCCAGTTAGTCAACTCCTGGACATTTTCGGTTCGAGTTCAGGGATTGTTTCCCAGTCCAATCTTGGTGAGGGTGAACAAGTGGACAATCACAAAAACAAAATTACTAATCCAACTGCAGTGGATGCCACAAATCCTGTCGAAGGAGAGCAACAAGCTCAGGCTCCTGTTGGTTTAGGCGCAGGTTTGGCTGCACTGGATTCCAAAAAGCTGAAAACAAAACCGACGGCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22119.p1 GENE.R_Transcript_22119~~R_Transcript_22119.p1 ORF type:complete len:1422 (+),score=361.65,CLU|PF13236.2|9.5e-85,eIF3_p135|PF12807.3|4.8e+03,eIF3_p135|PF12807.3|5.7e-48,eIF3_p135|PF12807.3|1.8e+03,TPR_12|PF13424.2|0.0028,TPR_12|PF13424.2|2.9e-10,TPR_12|PF13424.2|6e-14,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|9.8e-06,TPR_10|PF13374.2|0.059,TPR_10|PF13374.2|2.4e-07,TPR_10|PF13374.2|40,CLU_N|PF15044.2|1e-20,TPR_11|PF13414.2|5.2,TPR_11|PF13414.2|0.031,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|0.016 R_Transcript_22119:272-4537(+)
MAGKSNKGRNRNKGSQSHMAPPPVVNSSEPPSPPVNDDNSHTTPTDKPTPTPTPNATDPPPVNPQPNGGDSLTSESEVKPSQPTHSRQSQGELHLYPVSVKTLGGEKLELQLNPGDSVMDVRQFLLDAPETCFFTCYDLLLHAKGSVHHLEDYNEISEVADITSGQCSLEMIAALYDDRSVRAHVHRTRELLSLSTLHASLSTSLALQHETSRSASGSTQDSVKAEVPELDGFGFMEDITGCLSRLCSSSSRDIKCVESIVFSSFNPPPSHRRLVGDLIYLDVVTLEGGKFCITGTTRMFYVNSSSGNILDPRPTKGAFEATTLIGLLQKISSRFKKAFRENLERKAAAHPFENVQSLLPPNAWLGSYPMPDHNRDAARAEDALTLTYGSELIGMQRDWNEELQSCREFPHTTPQERILRDRALYKVTSDFVDAATNGAIGVINRCIPPINPTDLECFHMYVHNNIFFSFAIDADLELLSKKHRPNSSGKVNQQNLSGKTLEKSSDRAGEIFNGVEVNCSYRDGENGVLDVASDISAEVQAADSEQATYASANNDLKGTKAYQEADVPGLYNLAMAIIDYRGHRVVAQSVLPGILQGDKSDSLLYGSVDNGKKICWNEDFHCKVLEAAKRLHLKEHTVCDDSGKAFRLAAPVECKGIVGSDDRHYLLDLMRVTPRDANYIGPGSRFCILRPELIKAFCQAKAAGRPNSTPDSEADGCLGAESSNTNLEVGSDSNAEVALSSQDPAIERIIDTVEDGLSAVTGCSEANEQICFNPNVFTDFKLAGSPEEIAVDEDNVRKASSYLSNVVLPKFIQDLCSLEVSPMDGQTLTEALHAHGINVRYIGKIAEGTKHMPHLWDLCTNEIAVRAAKHMLKDVLRDTEDHDLGSSIAHFFNCFFGKSQAATEKNSSNNLPRRSQKKDQAGHQKSSKGKSRWRNGSSAKSSSSWCLGISSDGLWSDILEFAKSKYQFDLPEDARSRVKKVSVIRNLCQKAGITLAARKYDLEAVASFQTSDILNIQPVVKHAIPVCSEAKNLVETGKFQLAEGMLGEAYTVFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAYKLSHQHEKKTYEILVKQLGEEDSRTQDSQNWMKTFKMRELQMNAQKQKGQNLDAATAKKAVDIIKALQAAAAAGGSKGSASLNKSLNAAIMSDAVPRARGVDERGARAAAEARKKAAAKAHLTHSRAVPMPVSQLLDIFGSSSGIVSQSNLGEGEQVDNHKNKITNPTAVDATNPVEGEQQAQAPVGLGAGLAALDSKKLKTKPTAD*

Click here to download the sequence:
Link to NCBI Protein BLAST