Transcript Information: R_Transcript_22165.p1


Annotated TAIR IDAT1G51580.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19125612-19128102 | Forward length=621
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.847298884904
Replicate 213.386438650918
Replicate 315.359212852774
Condition 2: 8 Hour
Replicate 116.660069560481
Replicate 217.498218903728
Replicate 320.185069470776
Condition 3: 24 Hour
Replicate 116.565930091819
Replicate 214.352268965038
Replicate 318.173646066221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22165.p1 GENE.R_Transcript_22165~~R_Transcript_22165.p1 ORF type:5prime_partial len:607 (+),score=100.28,KH_1|PF00013.25|0.00061,KH_1|PF00013.25|9.4e-10,KH_1|PF00013.25|1.3e-09,KH_1|PF00013.25|1,KH_1|PF00013.25|2e-08,KH_3|PF13014.2|0.00017,KH_3|PF13014.2|4.4e-11,KH_3|PF13014.2|1.1e-09,KH_3|PF13014.2|1.7,KH_3|PF13014.2|0.00086,KH_2|PF07650.13|4.5,KH_2|PF07650.13|0.00054,KH_2|PF07650.13|0.56,KH_2|PF07650.13|5.9e+03,KH_2|PF07650.13|2.8,KH_4|PF13083.2|1.5e+02,KH_4|PF13083.2|2.8e+02,KH_4|PF13083.2|0.66,KH_4|PF13083.2|3.4 R_Transcript_22165:1-1821(+)
CAGACAACAGTCGTTAGCAGCGTTAGTATTTCATTGTCACCCCCGCTAGCGTCTCGCATCCAATTCTCTCTCCTCTCTCCTCTCTCCTCTCGCCTCTCTCCACTTTCACTCTCTGAGATGTCCGACAGCAAGAACCCCAAACCAAAACGGGGCCTAGTCAGGGCCCACCAACACAAGCCCATAACCCTCACCGTCTCTGATGGCCAAGTAGCCTTCCGTCTCCTCTGCAGCATCTACGCCGCCGGTGGTGTCATCGGTCACTCCGGCTCCGTCGTTAAGCGTCTTGAGAGAGACACCTCTTCCAGGATCCTCGTCGACCACCCCGTCTCCTCCACGTCCAAGGAGCGCGTCGTCAAGGAGCGCGTCGTCCACGTCATTGGCTCCGTTTCCGTTGACCGGAGGTTCCGATTCCACGACGATGGTGAAAACGTCGACGTTTCGGCCGCTCAGGAGGGTCTTCTTAGGGTTTTCGACAGGGTTCTGGAGGTGGAGCCCGTTTCCGAAGGTGGAGTTATACGGTGTCGTTTATTGGTGGGTGCTGGAATGGCTGGTGCTGTTATTGGGGAAGGAGGTAAGAGGATTAACAAGATTACTAAGGAGACAGGTGCTTTTATTAAGATCTTGACCCAGGATTCCCTCCCTCCTTGCGCTGATTCCTCCGATGAATTAATTCAGATTACTGGTGGAAGCCTACCTGTGAGGAAAGCTCTGGTTGTTATTTCACAGTGTCTTCAACAGAAGGCATCACAAGTTGTAAGAGCTAATGGGGCAACTCCTACTGCAGTTTTACAGCCAAGTATGGACATGGAGACCAAGGAAGTTGGGGTCAGTGGTACATTGAATGCAGTAGTAACAACAGAAGTTGTTTTCAGATTACTTTGTCCATGTGATGCAGCTGGTGCTGTGATTGGCTGGAAAGGGAGGAAAATTAAGGCTCTAGAGGAGGAAACAGGTGCTTCTATATCCTTTTCTGCTCCAGAGGCTGGCTGCAATGAGCGTGTCATCACTGTTTCAGCTTTTGAGAACAGGGACTCAAATCACTCCTATGCCCAAAATGCTGTTCTCCGTGTTTTCAATGAATCAACATCATTAGGTACGAGGAGAGCTGTGGCAGCCAGACTGCTTGTCCAGTCAAATGAAGCTGGTTGGTTACACTTTGGTGGGTCATCGAAAATCTCAGCTATACAAAAAGCCACTGGGGCTGAATTTCAAACATTGGAACATTATTTTATCCCAACCGGTGCTTCTTCCAATGAAAGAATTATACAGATACATGGTGAATGTTCCAGTGTGCTTATTGCTCTATTTCAAGTCACCTGGAGATTGAGAGAGATTATGTTTGGCGATACGGTAGGAAGAGACAATGCACCTCTTCTCCCACATGAACTGTTCAATATGCGTCCTTATGTTGAAGGAACTGCTACATTAACAGCCAGAATGAATAACTGCAGAGTTTCTGAAGAAGTTAACAGTCCTCTGCCACACAAGTTCTCACAGTTTCCTAACGGTCACTGCTCGCCAACCGATATGAACAATCCGAGGGATCTGGTAATTAACAATGGTTTTGAACTTGGAAGTGTAAACAAATCTATTGTCGTGACAAATACAAAGGTGGAGCTTGCGATTCGTGAAGATGTCTTTGGTGCTGTCTATGGTCATAATGGGAGCAATCTAGCTCGTTTACGACTGATTTCAGGTGCAACTGTTGAAGTGCAGGATCCTTCCCCTGGGAGTGAGGGGAAGGTCATAATATCTGGGACACCTGATCAAACCCTGGCTGCTCAGAGCCTTCTCCAGGCATTTATGATGGAGACTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22165.p1 GENE.R_Transcript_22165~~R_Transcript_22165.p1 ORF type:5prime_partial len:607 (+),score=100.28,KH_1|PF00013.25|0.00061,KH_1|PF00013.25|9.4e-10,KH_1|PF00013.25|1.3e-09,KH_1|PF00013.25|1,KH_1|PF00013.25|2e-08,KH_3|PF13014.2|0.00017,KH_3|PF13014.2|4.4e-11,KH_3|PF13014.2|1.1e-09,KH_3|PF13014.2|1.7,KH_3|PF13014.2|0.00086,KH_2|PF07650.13|4.5,KH_2|PF07650.13|0.00054,KH_2|PF07650.13|0.56,KH_2|PF07650.13|5.9e+03,KH_2|PF07650.13|2.8,KH_4|PF13083.2|1.5e+02,KH_4|PF13083.2|2.8e+02,KH_4|PF13083.2|0.66,KH_4|PF13083.2|3.4 R_Transcript_22165:1-1821(+)
QTTVVSSVSISLSPPLASRIQFSLLSPLSSRLSPLSLSEMSDSKNPKPKRGLVRAHQHKPITLTVSDGQVAFRLLCSIYAAGGVIGHSGSVVKRLERDTSSRILVDHPVSSTSKERVVKERVVHVIGSVSVDRRFRFHDDGENVDVSAAQEGLLRVFDRVLEVEPVSEGGVIRCRLLVGAGMAGAVIGEGGKRINKITKETGAFIKILTQDSLPPCADSSDELIQITGGSLPVRKALVVISQCLQQKASQVVRANGATPTAVLQPSMDMETKEVGVSGTLNAVVTTEVVFRLLCPCDAAGAVIGWKGRKIKALEEETGASISFSAPEAGCNERVITVSAFENRDSNHSYAQNAVLRVFNESTSLGTRRAVAARLLVQSNEAGWLHFGGSSKISAIQKATGAEFQTLEHYFIPTGASSNERIIQIHGECSSVLIALFQVTWRLREIMFGDTVGRDNAPLLPHELFNMRPYVEGTATLTARMNNCRVSEEVNSPLPHKFSQFPNGHCSPTDMNNPRDLVINNGFELGSVNKSIVVTNTKVELAIREDVFGAVYGHNGSNLARLRLISGATVEVQDPSPGSEGKVIISGTPDQTLAAQSLLQAFMMETP*

Click here to download the sequence:
Link to NCBI Protein BLAST