Transcript Information: R_Transcript_22212.p1


Annotated TAIR IDAT1G11720.2
Annotated Gene Namestarch synthase 3
Annotated Gene Symbol(s)SS3
Annotation TypeOrtholog
Chromosome Positionchr1:3951597-3956840 | Forward length=1094
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.258314848407
Replicate 26.3950563863381
Replicate 37.4315751743243
Condition 2: 8 Hour
Replicate 112.747602972535
Replicate 214.901564768973
Replicate 318.816707803424
Condition 3: 24 Hour
Replicate 110.883052128553
Replicate 27.3405289131998
Replicate 312.213673378719


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22212.p1 GENE.R_Transcript_22212~~R_Transcript_22212.p1 ORF type:complete len:1310 (+),score=326.38,CBM53|PF16760.1|8.3e-25,CBM53|PF16760.1|1.1e-24,CBM53|PF16760.1|7e-25,Glyco_transf_5|PF08323.7|3.1e+03,Glyco_transf_5|PF08323.7|1.9e-46,Glycos_transf_1|PF00534.16|9.8e-07,Glyco_trans_4_4|PF13579.2|4.6e-06 R_Transcript_22212:346-4275(+)
ATGGAGGTTACTTTGCAAGCACAAAGACCATTTTTGTGCAGGCAAAGTCATAAGCAAAATGCCCACTTGAATTTTAGACCTTATATTGGGTTGTTCTCTCATAGAACTTCTACTAAATACTCTCAATCTTATTCTTGGCATGTAGAGTACTCAGCTAATGGGATTTTCCGCCCATTTTCTGCCACTGGAGACTTTTCAAGGAGGAGACAGAAAAGATGGTCAACACCGAGGTCCAAAGGCCCTGCTCCGAAAGGGTTTGTACCTAAGTCTCCAGTTGGAACAGGCTCACAAAAGAAGGAGAAAAGAAACACTGAAGACAACAAAACTTCTGCTACTCCTGCTCCCAAGCCTGATACTGGAACATCTGGTATAGAAACCAGTGGTGCTGATGACAGAGGAGTATCAGAGGCTTCTCAAGCGAATAGAAATGAGCAACATCAGGCAGGTGGTACTAATGGAAAAGTCGGAGACTTTTCGCCAGCCAATGAAACTGTGGCTATTTCTGGTACAAATCTGTTGAAGGAAGTTGAAAGTGTTAGAGGGTTTATAGGAAAAGGGAAAAGCACTGAGGATCTGGATATTGTTGAAGAGGGTTCCAGTTCTACCACTGAAAACTATGAAATCATCGAAACCGAGGATAATGTCACTGATCATGATATGGTGGAATCTGATATGAAGGGTTCTGCTACAATTATTAGTGATGAGAAAGATGATGATGATTTGGAACATATTACGCAGAATCCGACACCAGCAAACTATCAAAACATTGAAGCTGACAATTATGGGGCTGAAGTGTTGGATTCAGAACCAAGACGTTTCGATATAACCGCTGTTGAAAAGGAAGTGAAGGATTTAGTTAATACTATTCAAGAGAATTTGGCTGTGGTAAACTATCATAGTATTGTATCGAACAAGGATTTCTCTGAAAATGAAGTGTTGGCAACAGAGTCTCTTGATGCTGACATCGGTGATGAGAGGGAAGCAAAGGAAGCAGTTAGTCTGCAGGAGAATGTGGATTTAGTTAGTCTTCAAGAGAATGTGGATTTGGTAAACATTGAAAGCATGAAATCTGAAGATGTAGCTGAAACTAATGTGCTGGGATCAGAAACAATGGATAATATAACCAGTGATGTGAAGGCATTGGAGGATTCATTGCGAAAATTGGAGTTGGAAAAGGCAGCACTTGAGCATAAACAAGTGCTTGAGAAACTGGCTGAGGAAAACTTCTCAAAAGGCAACAAAATTTTCATCTATCCTGGGACAGCAAGGTCGGATGGTGACATAGAAGTATTCCTTAATAGAAGTATCTCCTCTCTTAAGAATGAACCAGATGTGTTGGTAATGGGAGCGTTTAATGATTGGCGCTGGAAGTCGTTTACCACAAAGTTGGAGAAAACTCACCTGAGAGGTGATTGGTGGTCTTGTCAGATTCATGTTCCCAGGGAAGCATACAAATTAGATTTTGTATTCTTTAATGGAAAAGATGTCTATGACAATAATGACAAGAAAGATTTCCACATATCTGTGGAAGGAGGCATGGACGTCGCAACTTTTGAAGATTTTTTGCTCGAGGAGAAACGTAGAGAACTTGAGGAACTGGCCAGGCAACAAGCTGAGAAGGAGAGACTAGCAGAGGAGCAGAGGCGCAGGGAAGAAGAGAAGGCTGCAGCTGAAGCTGATCGTTCGCAGGCAAGGATAGAAGTGGAGAAAAAGAGAGAAAAGCTGAGTATGTTGATGAACAAGGCCTTACCATTCTTAGAAAATGTCTGGTTCTTTGAGCCCCGGGAGTTTGAAGGTGGTGACTTGGTTCGTTTGTATTATAAGCGGAGCTCTGGTCCTCTTGCTCAATCAAATGATCTTTGGATTCATGGGGGTCATAATGGTTGGGAAGGTGGGCTATCAATTGTTGCAAGGTTAGTGAAATCTGAAGAAAAGGATGGTGACTGGTGGTACGCTGAAGTTACAATTACTGATCAAGCATTTGTCTTGGACTGGGTTTTTGCTGATGGACCACCTCAGAATGCTTCCTGCTATGATAATAATAAATCCCATGATTTTCATGCTGTTGTTCCCAAATCCATGTATGATGAAGTGTACTGGGTTGAGGAAGAACAAAGGATATACCAGAGGCTTCAGGAGGAAAGGCGAGCGCAGGAAGAGGCTATACGTGCCAAGGCTGATAAGACAGCTCGCATGAAAGCTGAAACAAAAGAGCAAACTTTGAAGACATTTCTGCTGTCTCAAAGACACATTGTCTACACCGATCCTGTTGATGTTCAAGCTGGGCGTGATGTTACAGTGTATTACAATCCATCTAACACAGTGTTGAATGGGAAACCTGAAGTTTGGTTTAGATGTTCCTTCAATCGGTGGACCCATCGTAGAGGTCCATTGTCCCCTCAGAAAATGTTGCCTGCAGAGAATACTTCTCATGTCAGCACAACTGTAAAAGTGCCACTAGATGCTTACATGATGGACTTTGTTTTTTCTGAGAGAGAAGATGGTGGAATTTTTGACAATAAAAATGGTATGGATTATCATGTACCTGTCTTTGGTGGGATCGTTAAAGAGCCACCAATGCATATCGTGCATATTGCTGTTGAAATGGCCCCTATTGCTAAGGTTGGTGGGCTTGGAGATGTTGTTACGAGCTTGTCTCGTGCTGTTCAAGATTTGAACCATCATGTTGACATAATTTTTCCAAAGTACGATTGCTTGAACCTTAGCCATGTAAAGGACTTACATTATGAGAGGAGCTATTCATGGGGTGGCACTGAGATAAAAGTTTGGTTTGGGAAGGTTGAAGGCCTTTCTGTCTACTTTTTGGAGCCTCAAAATGGATTGTTTTGGACTGGGTGTGTCTATGCTGGTAGAAACGACGGTGAGAGATTTGGCTTCTTTTGCCACGCTGCGCTTGAATTTCTTCTCCAAAGTGGATCGCATCCTGATATAATTCATTGCCATGATTGGTCGAGCGCTCCAGTGGCATGGCTGTACAAAGAGCACTATGGGCAGTATGGACTTAGTAATGCAAGGATTGTCTTCACTATTCATAATCTTGAGTTTGGGGCATATTTCATTGGAAGAGCAATGGCTTACGCAGACAAGGCTACAACTGTCTCTGATACCTATTCAAAGGAGGTTGCTGGAAATCCTGCAATTGCCCCACACCTTTACAAGTTTCATGGTATACTGAATGGGATAGATCCAGATATATGGGATCCTTACAACGATAAGTTCATTCCGTTATCGTATACATCAGAAAATGTTGTTGAAGGCAAAAAGGCAGCCAAGGAAGCATTGCAGCAAAGACTTAGCATTAGGAAAGCTGATGTCCCTTTGGTGGGGATAATTTCTCGATTAACTCATCAGAAAGGAATCCATCTCATCAAGCATGCCATTTGGCGTACTTTAGAGCGCGGTGGACAGGTTGTATTATTGGGTTCTGCTCCAGATCCGCGTATACAGAATGATTTCGTTAATCTCTCGAATCAAATGCATAATTTGCATAGTGATCGTGCTCGCCTTGTTTTGACCTACGATGAACCTCTTTCACACCTGATATATGCAGGTGCAGATTTCATCCTTGTGCCTTCTATATTTGAGCCATGTGGCCTAACTCAGCTTGTTGCTATGAGATACGGATCAATACCTGTTGTTCGTAAAACAGGAGGTCTGTATGATACCGTATTTGATGTTGATCATGATCAAGAGAGAGCAAAGGCACATGGCCTCGAACCTAATGGATTCAATTTTGAAGGAGCTGATACTGCTGGCGTGGATTATGCTCTGAATAGGGCAATATCAGCCTGGTATGATGGAAAGGAATGGTTGAACTCGCTGCGCAAGCGTGTGATGAAGCAAGACTGGTCTTGGAATCGGCCAGCGCTTGAATACATGGAGCTATATCACGCAGCACGCAAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22212.p1 GENE.R_Transcript_22212~~R_Transcript_22212.p1 ORF type:complete len:1310 (+),score=326.38,CBM53|PF16760.1|8.3e-25,CBM53|PF16760.1|1.1e-24,CBM53|PF16760.1|7e-25,Glyco_transf_5|PF08323.7|3.1e+03,Glyco_transf_5|PF08323.7|1.9e-46,Glycos_transf_1|PF00534.16|9.8e-07,Glyco_trans_4_4|PF13579.2|4.6e-06 R_Transcript_22212:346-4275(+)
MEVTLQAQRPFLCRQSHKQNAHLNFRPYIGLFSHRTSTKYSQSYSWHVEYSANGIFRPFSATGDFSRRRQKRWSTPRSKGPAPKGFVPKSPVGTGSQKKEKRNTEDNKTSATPAPKPDTGTSGIETSGADDRGVSEASQANRNEQHQAGGTNGKVGDFSPANETVAISGTNLLKEVESVRGFIGKGKSTEDLDIVEEGSSSTTENYEIIETEDNVTDHDMVESDMKGSATIISDEKDDDDLEHITQNPTPANYQNIEADNYGAEVLDSEPRRFDITAVEKEVKDLVNTIQENLAVVNYHSIVSNKDFSENEVLATESLDADIGDEREAKEAVSLQENVDLVSLQENVDLVNIESMKSEDVAETNVLGSETMDNITSDVKALEDSLRKLELEKAALEHKQVLEKLAEENFSKGNKIFIYPGTARSDGDIEVFLNRSISSLKNEPDVLVMGAFNDWRWKSFTTKLEKTHLRGDWWSCQIHVPREAYKLDFVFFNGKDVYDNNDKKDFHISVEGGMDVATFEDFLLEEKRRELEELARQQAEKERLAEEQRRREEEKAAAEADRSQARIEVEKKREKLSMLMNKALPFLENVWFFEPREFEGGDLVRLYYKRSSGPLAQSNDLWIHGGHNGWEGGLSIVARLVKSEEKDGDWWYAEVTITDQAFVLDWVFADGPPQNASCYDNNKSHDFHAVVPKSMYDEVYWVEEEQRIYQRLQEERRAQEEAIRAKADKTARMKAETKEQTLKTFLLSQRHIVYTDPVDVQAGRDVTVYYNPSNTVLNGKPEVWFRCSFNRWTHRRGPLSPQKMLPAENTSHVSTTVKVPLDAYMMDFVFSEREDGGIFDNKNGMDYHVPVFGGIVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHHVDIIFPKYDCLNLSHVKDLHYERSYSWGGTEIKVWFGKVEGLSVYFLEPQNGLFWTGCVYAGRNDGERFGFFCHAALEFLLQSGSHPDIIHCHDWSSAPVAWLYKEHYGQYGLSNARIVFTIHNLEFGAYFIGRAMAYADKATTVSDTYSKEVAGNPAIAPHLYKFHGILNGIDPDIWDPYNDKFIPLSYTSENVVEGKKAAKEALQQRLSIRKADVPLVGIISRLTHQKGIHLIKHAIWRTLERGGQVVLLGSAPDPRIQNDFVNLSNQMHNLHSDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDQERAKAHGLEPNGFNFEGADTAGVDYALNRAISAWYDGKEWLNSLRKRVMKQDWSWNRPALEYMELYHAARKY*

Click here to download the sequence:
Link to NCBI Protein BLAST