Transcript Information: R_Transcript_222184.p1


Annotated TAIR IDAT1G05500.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1, SYT5
Annotation TypeOrtholog
Chromosome Positionchr1:1625098-1628940 | Forward length=560
E-Value2.4E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3237802784596
Replicate 22.4058260893675
Replicate 32.7838049161991
Condition 2: 8 Hour
Replicate 12.0829989278039
Replicate 23.2997829105916
Replicate 33.9076383974444
Condition 3: 24 Hour
Replicate 15.580022590067
Replicate 23.9821995219098
Replicate 34.9019338621697


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_222184.p1 GENE.R_Transcript_222184~~R_Transcript_222184.p1 ORF type:complete len:576 (+),score=88.64,C2|PF00168.26|4.9e-21,C2|PF00168.26|2.5e-25,SMP_LBD|PF17047.1|5.6e-15 R_Transcript_222184:145-1872(+)
ATGGGTTTCGTTTTAGGAATCGTTTTTGGAGTTTCCTTTGGTGTTGGTTTGGTCTTTGCTTTTGCATACCATGAGAATGTTCGCTCCAAACGCCGCTCTGAGTTGGCGGCGACAGTGGCAGCATTTGCTAAGATGACAGTGCAGGATGCAAGAAAGATTTTCCCACCTGAAGCATACCCACCATGGGTTGTCTTCCCACAAATGCAAAAGTTAAATTGGCTTAATGCTCAGCTGGATAAACTTTGGCCTTATATTAATGAGGCAGCATCAGAGCTCATAAGGAGTTCTGTAGAGCCAACTCTTGAGCTATATAGACCAGCTATCTTGGCCTCTCTTAAGTTCTCAAAGCTGACTCTTGGGACTGTTGCCCCTCATTTTACAGGCATTTGTATCATTGATAGCGACCCTGGTGAGATTATCATGGAAATGGAGATGCAGTGGGATGGTAACCCAAATATTGTGCTTGACATAAAAACGCATGTTGGTGTTGCCCTTCCTATACAGGTTAAGAATATAGGATTTACTGGGATCTTTAGGATAATCTTCAAACCATTGGTGGATGAGTTGCCTTGTTTTGGCGCTGTATGTTATTCTTTAAGAGAAAAGAAAAACTTGGACTTCACCCTCAAAGTTATCGGCGGTGACTTATCAGCGGTTCCAGGAATTTCGGATGCCATTGATGAAACCATAAGAGATGCTATAGAAGATTCAATAACATGGCCGGTTCGTCAGATAATACAAATAATACCTGGAGATTACAGCGAATTGGAATTGAAGCCTTGTGGTATAGTAGAGGTTAGGCTTGTGCAAGCAAAAGAGCTGTCAAATAAAGACCTCATTGGAAAGTCCGATCCTTTTGCTGCTGTATTTATACGCCCATTACGTAACAGCACAAAAAAGACCAAAACAATTAACAACCAATTGAATCCAATATGGAATGAGAGTTTTGAGTTCGTAGTCGAGGACCCATCGACACAGTTTGTGACTGTTCGAGTGTATGATGATGAAGGGCTTCAACCTCCTGAGCTAATTGGTTGTGGGAGAGTAGCACTGAGGGACCTTGAGCCAGGTAAAGTGAAGGTCGCATGGTTGAATCTAGTGAAGGATCTGGAGGTTCAGAGAGATACAAAGTACAGGGGTCAGGTGCATCTGGAGCTCCTGTATTGCCCATTTGGCACAGAAAATCAAATTATAAATCCTTTTCACCGTGATCTGCCATTGACCTCAGTGGAGAATCTCTTGAAAGAGGATGGCGGAGAAGATGCCGATGATATCGAAAGAAAAGCCTCCGAAAGGAAGCGTGAAGTAATCCTTAGAGGGGTACTCTCTCTAACAGTTGTATCTGCTGAAAACTTGCCAGTTATGGATCTGAATGGGAAGTCTGATCCCTATGTAGTCGTGACACTGAAAAAGGCCGGAACCAAAGTAAAAACAAGGGTTTTAAATGAAACTCTGAATCCAGTTTGGAACCAAACCTTCGACTTCTTAGTGGAGGATGCACTGCATGAATTACTCATCTTCGAGGTCTATGACCATGACACGATTGGAAAGAATTATATTGGGAGATACATCATGACTTTAACCAGAACACTGCTTGAAGGAGAATTCTATGACATCTTCACGCTAGATGGAACCAAGAACGCGAGACTTGCTTTGCATCTCAGGTGGAACCCGCAACCAATCGCGAGGGAACCAAGTGGCAGAAAGTCAATTGCAGAACCTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_222184.p1 GENE.R_Transcript_222184~~R_Transcript_222184.p1 ORF type:complete len:576 (+),score=88.64,C2|PF00168.26|4.9e-21,C2|PF00168.26|2.5e-25,SMP_LBD|PF17047.1|5.6e-15 R_Transcript_222184:145-1872(+)
MGFVLGIVFGVSFGVGLVFAFAYHENVRSKRRSELAATVAAFAKMTVQDARKIFPPEAYPPWVVFPQMQKLNWLNAQLDKLWPYINEAASELIRSSVEPTLELYRPAILASLKFSKLTLGTVAPHFTGICIIDSDPGEIIMEMEMQWDGNPNIVLDIKTHVGVALPIQVKNIGFTGIFRIIFKPLVDELPCFGAVCYSLREKKNLDFTLKVIGGDLSAVPGISDAIDETIRDAIEDSITWPVRQIIQIIPGDYSELELKPCGIVEVRLVQAKELSNKDLIGKSDPFAAVFIRPLRNSTKKTKTINNQLNPIWNESFEFVVEDPSTQFVTVRVYDDEGLQPPELIGCGRVALRDLEPGKVKVAWLNLVKDLEVQRDTKYRGQVHLELLYCPFGTENQIINPFHRDLPLTSVENLLKEDGGEDADDIERKASERKREVILRGVLSLTVVSAENLPVMDLNGKSDPYVVVTLKKAGTKVKTRVLNETLNPVWNQTFDFLVEDALHELLIFEVYDHDTIGKNYIGRYIMTLTRTLLEGEFYDIFTLDGTKNARLALHLRWNPQPIAREPSGRKSIAEPL*

Click here to download the sequence:
Link to NCBI Protein BLAST