Transcript Information: R_Transcript_222292.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value2.6E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28189901088369
Replicate 20.48640078184474
Replicate 30.35377200920699
Condition 2: 8 Hour
Replicate 10.66178013370933
Replicate 20.17267090224854
Replicate 30.56066750951002
Condition 3: 24 Hour
Replicate 10.26592054703904
Replicate 20.25546631919588
Replicate 30.42254256152311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_222292.p1 GENE.R_Transcript_222292~~R_Transcript_222292.p1 ORF type:5prime_partial len:259 (+),score=39.39,RPE65|PF03055.11|1.7e-49 R_Transcript_222292:2-778(+)
TTTGCTATCACCAAGAAGTACGCCATTTTCGCTGACATCCAACTTCGATTGGACCCTATGAACATGATCATATGGGGCGGATCTCCATTGCGTTCGGACCCTAAAAAGGTATCAAGGGTAGGAGTCATCCCAAGGTATGCTAGCGATGAGAAGGACATGAGATGGTACGAGGTGCCAGGGTTCAACATAGTCCATGCCATCAATGCGTGGGATGAGGTGGATGAGGAGGGGAACGAGGCCATCGTCGTGGTGGCCCCCACCATGATATCCTCCAAACCCGAATTAGACAGATTGGATCTTGTTGAGTCATTGATTGAGAAAGTCAGGATCGATCTCAAGACCGGGATTGTGTCGAGGCAATCATTGTCCTTGGCAAGGAACCTGGATTTTGGAGTCATAAATCCAGCCTATATAGGGAAGAAGAACAGGTATATTTATGCAGCCTTTGGTGACCCAATGCCGCAAATAACCGGGGTTGTGAAACTAGATGTGTCAAGAGAGTGCATAGTGGCGAGCCAGATGTACGAGCCAGGGTGCTATGGTGGTGAGCCGTTTTTCGTGGCGAGGGACCCGGATAATCTAGATGCTGAGTATGAGGATGATGGCTATCTTGTGTCCTATGTTCATAATGAAAATACAGGGGAGTCAAGGTTCATAGTCATGGATGCAAAGTCACCTGGGCTTGATGTGCTTGCCTCTGTGAAGTTACCCCAACGTGTGCCTTATGGATTTCATGGCTTGTTTGTTAGGGATAGAGATCTTAGAAGGTTCATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_222292.p1 GENE.R_Transcript_222292~~R_Transcript_222292.p1 ORF type:5prime_partial len:259 (+),score=39.39,RPE65|PF03055.11|1.7e-49 R_Transcript_222292:2-778(+)
FAITKKYAIFADIQLRLDPMNMIIWGGSPLRSDPKKVSRVGVIPRYASDEKDMRWYEVPGFNIVHAINAWDEVDEEGNEAIVVVAPTMISSKPELDRLDLVESLIEKVRIDLKTGIVSRQSLSLARNLDFGVINPAYIGKKNRYIYAAFGDPMPQITGVVKLDVSRECIVASQMYEPGCYGGEPFFVARDPDNLDAEYEDDGYLVSYVHNENTGESRFIVMDAKSPGLDVLASVKLPQRVPYGFHGLFVRDRDLRRFM*

Click here to download the sequence:
Link to NCBI Protein BLAST