Transcript Information: R_Transcript_22239.p1


Annotated TAIR IDAT4G31590.1
Annotated Gene NameCellulose-synthase-like C5
Annotated Gene Symbol(s)ATCSLC05, CSLC05, ATCSLC5, CSLC5
Annotation TypeOrtholog
Chromosome Positionchr4:15309889-15312336 | Reverse length=692
E-Value8.5E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.011514977933
Replicate 210.457301374654
Replicate 316.667548367628
Condition 2: 8 Hour
Replicate 110.146866213547
Replicate 29.657812779656
Replicate 316.668405083312
Condition 3: 24 Hour
Replicate 120.858552481202
Replicate 216.691625891896
Replicate 320.652795278493


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22239.p1 GENE.R_Transcript_22239~~R_Transcript_22239.p1 ORF type:3prime_partial len:514 (+),score=84.39,Glyco_tranf_2_3|PF13641.2|2.5e-32,Glyco_trans_2_3|PF13632.2|5.6e+03,Glyco_trans_2_3|PF13632.2|9.7e-20,Glyco_transf_21|PF13506.2|4.1e-12,Glycos_transf_2|PF00535.22|6.4e-12 R_Transcript_22239:388-1926(+)
ATGGTGCCTGGAATAGATACAAGTAAATTCTGGGGAAAGGAATCAAAGAAGGGAACACCAGTAGTAGTGAAAATGGAGAACCCAAATTACTCACTCCTGGAAATAGAATCACCAGATTCTGCATTCAGGGCAGTTGATATTAAAGATAGAGGCAAAAATGCAAAGCAATTCACTTGGGTTTTACTCCTTAGGGCTCATAGAGCTGCTGGTTGTCTTGCTTGGCTTGGCCATGCTCTTTGGTCTTTACTTGGTACTATCAAAAAGAGGTTGTTTTTAGGTGAAGGTGTGAAAATTGAGAATGACAAGACCAGTAAAGGGAAATTACTATACAGGATCATTCTGGGGTTCTTAATCACTGCTCTTTCTTTTTTGGCTTTTGAAGTCATTGCTCATTTCAATGGCTGGCATTACTTCCAATACCAATACCAAAACTTACATATTACTATCCCACATACTACTGTGGAGATTCAAGGTTGGGTTTATGGGATTTATGTCGGTTGGCTCGAGTTTCGTGCTGCTTATATTGCTCCTTTGATTCACTCTCTATCAAGCTTCTGTGTTGTTCTTTTCATCATTCAATCTCTTGATAGATTGGTCCTTTGTTTGGGTTGCTTTTGGATTAAGATCAAGAAGATTAAGCCTAGGTTTGATGGTGATCCTTACAAATCTCTTGATGCTGAGAATCCTGGCTCTAATTTTCCTATGGTTCTTGTTCAGATTCCCATGTGCAATGAAAGAGAGGTATATGAACAATCAATTTCAGCAGTTTGTCAACTAGATTGGCCAAGAGACAAGTTACTGATCCAAGTACTAGATGATTCTGATGATGAAGGTATTCAATGGCTAATTAAGAGTGAAGTCTCAAAATGGAGCCAAAAGGGTATAAACATTATCTACCGACATCGTTTGGTTAGAACTGGTTACAAAGCTGGCAACCTTAAATCTGCTATGAACTGTGATTATGTCAAAGACTATGAATTTGTTGCTATTTTTGATGCTGATTTCCAACCCAACCCTGATTTCCTACAACTAACCGTCCCCCATTTTAAGGATAATCCTGAACTTGGGTTGGTCCAAGCAAGGTGGTCTTTTGTGAACAAGGATGAGAACTTGTTAACTCGTCTTCAGAACATTAACCTTTGCTTCCACTTTGAGGTGGAGCAACAGGTTAACGGCGTGTTCTTGAATTTCTTCGGATTCAATGGCACTGCAGGGGTTTGGAGGATCAAAGCACTCGAGGAATCCGGTGGATGGCTAGAGAGGACCACGGTCGAGGATATGGACATTGCCGTCCGCGCTCATATCAATGGGTGGAAGTTCATCTACCTGAATGATGTAAAGGTGCTCTGTGAAGTTCCTGAATCTTATGAAGCATACAGAAAACAGCAACACAGGTGGCATTCTGGTCCAATGCAGCTCTTTCGTCTATGCTTACCGGCCATAATAACCTCTAAGTTGTCATTTATGAAGAAAGCAAACCTAATCCTGCTGTTCTTTCTCCTAAGGAAGTTAATCCTGCCATTCTATTCCTTCACATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22239.p1 GENE.R_Transcript_22239~~R_Transcript_22239.p1 ORF type:3prime_partial len:514 (+),score=84.39,Glyco_tranf_2_3|PF13641.2|2.5e-32,Glyco_trans_2_3|PF13632.2|5.6e+03,Glyco_trans_2_3|PF13632.2|9.7e-20,Glyco_transf_21|PF13506.2|4.1e-12,Glycos_transf_2|PF00535.22|6.4e-12 R_Transcript_22239:388-1926(+)
MVPGIDTSKFWGKESKKGTPVVVKMENPNYSLLEIESPDSAFRAVDIKDRGKNAKQFTWVLLLRAHRAAGCLAWLGHALWSLLGTIKKRLFLGEGVKIENDKTSKGKLLYRIILGFLITALSFLAFEVIAHFNGWHYFQYQYQNLHITIPHTTVEIQGWVYGIYVGWLEFRAAYIAPLIHSLSSFCVVLFIIQSLDRLVLCLGCFWIKIKKIKPRFDGDPYKSLDAENPGSNFPMVLVQIPMCNEREVYEQSISAVCQLDWPRDKLLIQVLDDSDDEGIQWLIKSEVSKWSQKGINIIYRHRLVRTGYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLQLTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHINGWKFIYLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIITSKLSFMKKANLILLFFLLRKLILPFYSFTL

Click here to download the sequence:
Link to NCBI Protein BLAST