Transcript Information: R_Transcript_22243.p1


Annotated TAIR IDAT2G46900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19269678-19271987 | Forward length=627
E-Value4.9E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.175640503359
Replicate 213.098900410772
Replicate 317.750991520885
Condition 2: 8 Hour
Replicate 116.052666747892
Replicate 218.510216388172
Replicate 322.182255274763
Condition 3: 24 Hour
Replicate 121.29319280636
Replicate 218.057326765397
Replicate 320.598247764255


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22243.p1 GENE.R_Transcript_22243~~R_Transcript_22243.p1 ORF type:5prime_partial len:662 (+),score=148.47,Tcf25|PF04910.10|2.1e-72 R_Transcript_22243:3-1988(+)
CCCTCATCTTTTGAGACCACCAGCACCGGCACCCGGCAGCAACTCCATAAGGGAGTCCACTCAATATTTGAGTGGCCTACAACAATTCAGGGCAGTATGTCTGCTCGGTTACTAAGAAAAGTTCTCAAAGAGCAAGAGATTCAGGATAAACAGGGCAATGTTATCATAGAAAAGCAGCAGGAGGACCTAGATGAGGACGAGTCTGACTCAGGTGGTCATTCGGGCAACCCTTTCGATATTCTCAATGATAACGATGATGACCAGGAGTATGATCAGGAAGATGAGTTGGGTGCAACTGATGATGCTTTGGCAGAAAAGGCTGATAAATCAGGGCCTGCTATAAAAAATACAGTTCCTGCTGTCCATGTGTCTAGTAAGAAGTCAAAGAAAAAGAAGAAGAAGAAAAACAAAGAGGCTTCATCCTCAAATGTTGAGGTGGACTTAGATGCTTTGTCCCTTGAATTTGATTCATCTGCCCTTGAAGCTAGCTCCAGTAAGAAGACCAGTAGTAAGGTTGTTAAAGAATCTGATACTGTGGTTAAACAGAAGTCATCAATTCTAAAGGTTGATCCTAAATTGTTAAATGCTGAAAATGAGCTGCGGAGAATATTTGGATCCAAGGTGGTTAGCTCATTTGAGAATGCTAACCAAGCTGGCACTTCTAGACAAGTGCGTGGTGGAAGGCGTGGAGGATACACTCACAGGAAGTGTGTTCTTGTCTCCCCATCTGACCACTGGCCACGGTGGGATGGGTCTCTATCCATGGAGCTTCTAGAGACAAGGGATGGGAACCATTACTTCAGATATGTGCATTCTGCTTCGTATAGCCAAGCACAGAGGGGATTTGAAGCTGCCAAGGCAATTCATGATCTCAATGGTGTGGCAAGTATTCTGATGTACCATCCTTATCACATAGAGTCGCTCATAACATTGGCAGACTACTTTAAATTCTCAGGGGAACATCAAATGGCAGCAGATGCTGTTGCCAAATGTTTATATGGCTTGGAGTGTGCATGGCATCCTATGTTCAGTCCTTTGCAGGGTAATTGCCGTTTGGAACACAGCCACGAAACAAACAAGCCATTGTTTTCAACACTTTTTAGTCATATGAAGAACTTGAATAGGCGTGGGTGTCATCGTTCTGCATTGGAAGTATGCAAATTGCTACTTTCACTTGATCCAGCTGATCCTATGGGAGCTTTGTGCTGTGTTGATTACTTTTCTTTAAGAGCAGAGGAGTATTCATGGTTGGAAGAGTTCTCCGAAGAATATCAAAGTGACAACTCTTTATGGCACTTCCCAAACTTTGCTTATTCCCTTGCCATTTCTCGGTTTTATCTTGAACGCCAACCTCTTTCTGGGGACAGTAGTATTGAGCAGGAAAGGGAAACTTCATCTGGTTTGATGAAACAGGCTTTGATGCTTCACCCTTCGGTTCTGAAGAGGCTAGTCGAGAAGGTTCCCTTGAAGGACCAGGCATGGACCCAAATAACTAAGAATCGTCTCTTCAAATCTGAAGATACTGGAATCCCCTCTTTGGATCACTTAATTAGGATATATGTGGAGAGGAGTTACATTATTTGGAGGTTGCCAGATGTGCAGAAATTGTTAAAGGATGCTGCTTTAGATGTGATAGAATCATTGAAGCATGATGCAAGTGAGGCCAATACTTGGGCTTGTGTAAGAAAAGAAGCATTTCCCTCGGAGAAGAACGAGTATGGACATTTGCTGGTTTCAGATTTCTCTGATACAGTGCCAACTATGCCTCCGGATAACCTGCAAAATTTTATGATGGTAGATCCGAGGATGAGAGATATGGTGGAGAATCAGAACCAAGGCGCCAATGCGAGGGCCCCACGTGACTTGGCCGGTCGAAGTCCCTGGGCTGTGTTTTTTGAAACAATGTTCCCCTGGGAACACGTAGCTAATGAAGCTGACAATGGCGGCCAACACAATGGAAATCATCAAGACAATGAAAATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22243.p1 GENE.R_Transcript_22243~~R_Transcript_22243.p1 ORF type:5prime_partial len:662 (+),score=148.47,Tcf25|PF04910.10|2.1e-72 R_Transcript_22243:3-1988(+)
PSSFETTSTGTRQQLHKGVHSIFEWPTTIQGSMSARLLRKVLKEQEIQDKQGNVIIEKQQEDLDEDESDSGGHSGNPFDILNDNDDDQEYDQEDELGATDDALAEKADKSGPAIKNTVPAVHVSSKKSKKKKKKKNKEASSSNVEVDLDALSLEFDSSALEASSSKKTSSKVVKESDTVVKQKSSILKVDPKLLNAENELRRIFGSKVVSSFENANQAGTSRQVRGGRRGGYTHRKCVLVSPSDHWPRWDGSLSMELLETRDGNHYFRYVHSASYSQAQRGFEAAKAIHDLNGVASILMYHPYHIESLITLADYFKFSGEHQMAADAVAKCLYGLECAWHPMFSPLQGNCRLEHSHETNKPLFSTLFSHMKNLNRRGCHRSALEVCKLLLSLDPADPMGALCCVDYFSLRAEEYSWLEEFSEEYQSDNSLWHFPNFAYSLAISRFYLERQPLSGDSSIEQERETSSGLMKQALMLHPSVLKRLVEKVPLKDQAWTQITKNRLFKSEDTGIPSLDHLIRIYVERSYIIWRLPDVQKLLKDAALDVIESLKHDASEANTWACVRKEAFPSEKNEYGHLLVSDFSDTVPTMPPDNLQNFMMVDPRMRDMVENQNQGANARAPRDLAGRSPWAVFFETMFPWEHVANEADNGGQHNGNHQDNENN*

Click here to download the sequence:
Link to NCBI Protein BLAST